Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02639 ATGGCAGGAACTGGTTTCTACACCTCCTGTCTTTCCTCTTCCAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCAGTGCCAGGGAAACTACCTGGAACTGGAAGGAGAAGATTGGCATTAAAAGCAGAAGTGAAGTATGTGAACGCTGAAAAAGCTAAGGAACTTGTAGAAGTGGATGGATATACGGTTCTTGATGTACGGGACAAAACTCAGTTTGAGCGAGCTCACATAAAATCTTGTAGTCATGTGCCTCTTTTTGTTGAAAACAAAGACAATGATCCTGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTACCATTCACTAAGCCAAATCCTGAGTTTGTACAATCTGTTAAGAGCCAGTTTCCGCCTGAAAGTAAACTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAGTAAGTTAGAGGATGCTGGTTTCGAAAATATAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGGACTTTTGATTCTGTTGGGTCCACAGAGTTGGAGAATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTAAGTCTTTTATTTTATTTTTTAACATCTTTGTATTACTATTTTTTATGCTTGTATTGATTTTATTTAAATGA 717 0.3947 MAGTGFYTSCLSSSSNLGTCWLVLKTHNARAVPGKLPGTGRRRLALKAEVKYVNAEKAKELVEVDGYTVLDVRDKTQFERAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFFGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEDAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILVCKSFILFFNIFVLLFFMLVLILFK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02639 238 Gene3D - 41 182 IPR036873 -
Pumo5g02639 238 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Pumo5g02639 238 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 175 IPR036873 -
Pumo5g02639 238 Pfam Rhodanese-like domain 55 175 IPR001763 -
Pumo5g02639 238 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 220 IPR044615 -
Pumo5g02639 238 CDD RHOD 58 178 - -
Pumo5g02639 238 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 40 182 - -
Pumo5g02639 238 SMART rhod_4 53 183 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02639 Pumo-Chr5 72474766 72478412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02639 9 222 Sulfurtransferasese or Rhodanese AT2G42220 67.442 8.45e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02639 - - gmx:100801860 411.379