Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02638 ATGAGTCTCCAAAGCAACCTCTTATCTCTTTTGGTTCCCCTGGCCGCAGTTTTTGCATCTTTGTATCTCATAAATCCAACTCCACAGTTTCTCAACAACTTCACATATTTCAGTCTCACAACCTTGTCACCATCATCATCTGCGTACTTGTCAAAACCATTAACTTGGAACTTCTGGAGATACCATCATCACAAGAAACACCCTGACAGCGGCAATACCGATTCTATTTGTGATGATTTCCCACCGGGAATTCCACCTCCAGATACCAACACCACTTCTTATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAAGCGGCCGTGAATGCAGTTCCAGATTTTAGTGTCAAAAGAACCGTAATATGGATAAACAGTGGCATGTACTATGAGAAGGTTATGGTGCCCAAAACCAAACCCAACATTACATTTCAAGGACAAGGCTATACTTCAACTGCAATTGCATGGAATGATACCGCATTGTCCGCGAATGGAACATTTTATAGTGGCTCTGTACAAGTTTTCGCCTCGAATTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGCCGTAGGGGCACAAGCAGTAGCAATTAGAGTATCGGGAGATCAATCTGAATTTAGGGGTTGTGGATTCTTCGGAGCCCAAGACACCCTTCACGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGCTCCATTGACTTCATATTCGGCAATGCAAGGTCACTGTACGAGAATTGTGAAATAGTTTCTATAGCAAACCCCGTAGCCCCGGGGCAAAAGAGCATAAATGGTGCAGTTACAGCTCATGGTAGAGTTTCAGGGGATGAAAATACAGGATTTGCATTTGTGAAGAGTACAGTAGGAGGATACGGCAGAATATGGTTGGGTCGGGCATGGAGACCTTATTCTCGTGTTGTTTTCGCCTTCTCAGTAATGTCAGATATCATTGCCCCTGAAGGTTGGAATGATTTCAACGACCCTTCAAGAGATCAGACTATCTTCTATGGAGAATACAATTGCTCCGGGCCAGGGGCGAATACGAACTTCAGGGCACCTTATGTACAGAAATTAAATGAAACACAAGCTTTCGCATTCCTCAACATAAGTTTTATTGATGGCGACCAATGGTTGGAAACTTACAAATAA 1191 0.4274 MSLQSNLLSLLVPLAAVFASLYLINPTPQFLNNFTYFSLTTLSPSSSAYLSKPLTWNFWRYHHHKKHPDSGNTDSICDDFPPGIPPPDTNTTSYLCVDRKGCCNFTTVQAAVNAVPDFSVKRTVIWINSGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCEIVSIANPVAPGQKSINGAVTAHGRVSGDENTGFAFVKSTVGGYGRIWLGRAWRPYSRVVFAFSVMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGANTNFRAPYVQKLNETQAFAFLNISFIDGDQWLETYK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02638 396 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Pumo5g02638 396 Pfam Pectinesterase 97 389 IPR000070 GO:0030599|GO:0042545
Pumo5g02638 396 FunFam Pectinesterase 89 396 - -
Pumo5g02638 396 SUPERFAMILY Pectin lyase-like 94 393 IPR011050 -
Pumo5g02638 396 Gene3D - 88 396 IPR012334 -
Pumo5g02638 396 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 83 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02638 Pumo-Chr5 72467464 72469550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02638 66 393 Carbohydrate Esterase AT1G05310 74.085 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02638 - - gmx:100806629 764.607