Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02633 ATGTCAGCAGAAGCAAGGACTTCAGGGTCTTATGACTTGAGTGAATTGGATCAAGCCTTTTTCCTCTACCTTGATGGACAAGCAGACCCATCGAGTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCTCCGACTCTCAACATTTTCCCCTCTAAGCCTATGCACGTAGAGCCATCATCATCCAAATCCAAGGCTAACACAGAGCTAGTTTCTCCGCAAACAAGTGGATCGAAGAGACCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAGCTGCTTCTGCTCCTCAACCACCCAAACCTGTCAAGCGAGAGAGCAATCGCAAAGGTCCAACGTCAAGTTCTGAACATGAAGGACCTAAAACACCAGACCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAACTAGAGTCGAGTAGGATTAGGCTTAATCAGCTGGAACAAGAGCTACAACGTGCTAGAACTCAGGGCATGTTCTTCGGTGGAGGTGCACTTTTGGGAGGAGAGCAAGCCCTTCCTGTCGCTATGAATACCATTAGCTCAGAGGCTGCAATGTTTGACGTAGAGTATGCTAGGTGGCAAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTGAGACTGTTTGTGGACAATTGCTTGGCGCATTATGACCAAGTAATGAACCTCAAGAGCTTAGTGGCCAAAACAGATGTGTTCCATCTTGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGATTCAGGCCATCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTCACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCTACGCAAGAGGCAGAAGAGGCTCTCTCCCAAGGGCTCGAGGCTCTCAATCATTCTCTCTCAGACACTATAACATCAGACTCTCTCAGCTATCCTCCCAATATGGCTAACTACATGGGACAGATGGCTGTGGCCATGAACAAGCTCTCCACTCTCGAAGGTTTCGTGAGACAGGCAGATAATCTGCGGCACCAAACCATTCACCGTCTGCACCAGATCCTTACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCTGAGTACTTCCATCGTCTTCGAGCCCTGAGTTCGTTGTGGATGGCACGCCCTCGTTCAGAATAG 1269 0.487 MSAEARTSGSYDLSELDQAFFLYLDGQADPSSVQDQRQNSSSGMRPPTLNIFPSKPMHVEPSSSKSKANTELVSPQTSGSKRPSEPSMELANPRNEAASAPQPPKPVKRESNRKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARTQGMFFGGGALLGGEQALPVAMNTISSEAAMFDVEYARWQEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNHSLSDTITSDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQILTTRQAARCFLAIAEYFHRLRALSSLWMARPRSE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02633 422 MobiDBLite consensus disorder prediction 29 48 - -
Pumo5g02633 422 Pfam Seed dormancy control 222 296 IPR025422 GO:0006351|GO:0043565
Pumo5g02633 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 129 173 IPR004827 GO:0003700|GO:0006355
Pumo5g02633 422 PANTHER TRANSCRIPTION FACTOR TGA9 49 421 - -
Pumo5g02633 422 Pfam bZIP transcription factor 131 164 IPR004827 GO:0003700|GO:0006355
Pumo5g02633 422 MobiDBLite consensus disorder prediction 57 85 - -
Pumo5g02633 422 MobiDBLite consensus disorder prediction 107 134 - -
Pumo5g02633 422 FunFam BZIP family transcription factor 130 179 - -
Pumo5g02633 422 SUPERFAMILY Leucine zipper domain 131 173 IPR046347 GO:0003700|GO:0006355
Pumo5g02633 422 Coils Coil 150 177 - -
Pumo5g02633 422 Gene3D - 130 178 - -
Pumo5g02633 422 ProSiteProfiles DOG1 domain profile. 204 418 IPR025422 GO:0006351|GO:0043565
Pumo5g02633 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 134 149 IPR004827 GO:0003700|GO:0006355
Pumo5g02633 422 MobiDBLite consensus disorder prediction 27 134 - -
Pumo5g02633 422 SMART brlzneu 127 200 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02633 Pumo-Chr5 72363100 72369158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02633 11 422 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 66.051 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g02633 DOG1 6.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02633 K14431 - gmx:100815176 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02633 5 72363100 72369158 Pumo3g02871 3 50027490 50035733 PCT