Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02622 ATGCCAATGCATCATCATCATCTCCTCCCCCTTCTCATTTTCTTCATTCTCTTTTCCCTTGCTTCTCCGTCCACCTCTCTGAACTCCGACGGCCTCTCCCTGCTGGCCCTCAAAGCCGCCGTCGTCGCCGATCCCTCCGGCGTCCTCTCCTCCTGGTCGGAAACCGACTCCACCCCATGCCACTGGCCGGGAGTGTCCTGCTCCGGCGACAAAGTCACCCAAATATCTCTCCCAAACAAGAACCTCACCGGTTACATCCCCTCAGAACTCGGTTTCCTAACCTCCCTCAAAAGACTGAGCCTTCCCCACAACAACTTCTCCAACGCCATTCCCCCACCTCTCTTCAACGCCACGTCACTCATCGTCCTCGACCTCTCTCACAACTCTCTCTCCGGTTCCCTCCCAACACAGCTTCGCTCTCTCAAGTTCCTTCGCCACCTGGACTTATCCTCCAACTCCCTCAACGGTTCCCTCCCCGAATCCCTCTCCGATCTCACCTCCCTCGCCGGAACCCTCAACCTCTCCTTCAACCACTTCTCCGGCGGGATTCCGGCGACCCTTGGAAACCTTCCGGTCGCCGTCAGCCTCGACCTCCGCAACAACAACCTCACCGGAAAAATCCCCCAGATGGGGTCCCTTTTGAACCAGGGCCCCACCGCGTTCTCCGGCAACCCTGGCCTATGTGGGTTCCCCCTGCAGAGCGCGTGCCCCGAAGCGCAAAAGCCTGGAATTTTCGCGAACCCTGAAGATGGGTACCCTCAGAACCCCAATGCGCTTCACCCTGAAAGGTCGGAAGAGAGAGTGAAGCAGCACGGTGGCGGCTCCGTCGCCGTTCTTGTTATCTCCGGCCTCTCCGTCGCTGTCGGGGCGGTTTCGCTGTCTTTATGGGTTTTCCGGGGACGGTGGGGCGGAGAGGAGGGGAAATTGGGGGGTCCGAAATTGGAGGACAACGTGGATGGGGGAGAGGGGCAAGAAGGTAAATTTGTTGTTGTGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTGAGGGCCTCTGCGTATGTTGTTGGGAAGAGTAGGAGTGGGATTGTGTACAAGGTTGTCGGTGTCGGAAAAGGGTCATCCGCGGCGGCGAATGTGGTGGCTGTTCGGCGGCTCAGCGAGGGTGATGCCACTTGGCGGTTCAAGGAGTTTGAGTCTGAGGTTGAGGCCATTGCCAGGGTTCGTCACCCCAATGTTGTCCCTTTGAGAGCTTATTACTTTGCGCATGATGAGAAGCTGCTTATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCCTTACATGGTGGGCCTTCCAATTCATTGCCACCATTATCATGGCCAGCAAGATTAAAGATTGCTCAAGAAGCAGCAAGGGGCTTGATGTATATACACGAGTTCAGTGGTCGCAAATATATCCATGGCAACCTAAAGTCAACAAAAATCTTACTGGACGATGAGCTCCATCCATACGTGTCAGGCTTTGGACTTACTCGGCTCGGTTTGGGCCCGTCAAAGTCTACTACAATGGCACCAAAACAGAACAGCTTGAACCAATCTACTATAACCACTGCAATGAGTTCAAAGGTTGCTGCTTCTTTTAACCACTACTTGGCACCTGAGGTGCGCATTGCTGGTGGCAAGTTCACTCAGAAATGTGATGTATATTCTTTTGGTGTAGTGCTGTTAGAACTTTTGACAGGTAGGATGCCAGATTTTGGACCAGAAAATGAGGATAAGGTACTAGAGAGTTTTGTAAGGAAAGCTTTCAGGGAGGAGCAGCCATTGTCTGATATCATAGACCCAGCACTTATCCCTGAAGTTTATGCTAAAAAGCAAGTCATTGCTGCATTCCATATTGCTCTGAACTGCACTGAACTTGATCCAGAGTTGCGACCTAGAATGAAAACCGTGTCAGAAAGCCTTGATCACATCAAAATACAGTGA 1953 0.5274 MPMHHHHLLPLLIFFILFSLASPSTSLNSDGLSLLALKAAVVADPSGVLSSWSETDSTPCHWPGVSCSGDKVTQISLPNKNLTGYIPSELGFLTSLKRLSLPHNNFSNAIPPPLFNATSLIVLDLSHNSLSGSLPTQLRSLKFLRHLDLSSNSLNGSLPESLSDLTSLAGTLNLSFNHFSGGIPATLGNLPVAVSLDLRNNNLTGKIPQMGSLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIFANPEDGYPQNPNALHPERSEERVKQHGGGSVAVLVISGLSVAVGAVSLSLWVFRGRWGGEEGKLGGPKLEDNVDGGEGQEGKFVVVDEGFELELEDLLRASAYVVGKSRSGIVYKVVGVGKGSSAAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAHDEKLLITDFIRNGSLHTALHGGPSNSLPPLSWPARLKIAQEAARGLMYIHEFSGRKYIHGNLKSTKILLDDELHPYVSGFGLTRLGLGPSKSTTMAPKQNSLNQSTITTAMSSKVAASFNHYLAPEVRIAGGKFTQKCDVYSFGVVLLELLTGRMPDFGPENEDKVLESFVRKAFREEQPLSDIIDPALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDHIKIQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02622 650 Gene3D Ribonuclease Inhibitor 170 238 IPR032675 -
Pumo5g02622 650 Gene3D Ribonuclease Inhibitor 26 169 IPR032675 -
Pumo5g02622 650 PRINTS Leucine-rich repeat signature 120 133 - -
Pumo5g02622 650 PRINTS Leucine-rich repeat signature 141 154 - -
Pumo5g02622 650 SUPERFAMILY Protein kinase-like (PK-like) 349 644 IPR011009 -
Pumo5g02622 650 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Pumo5g02622 650 FunFam Leucine-rich repeat receptor-like kinase 32 144 - -
Pumo5g02622 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 648 IPR046959 -
Pumo5g02622 650 ProSiteProfiles Protein kinase domain profile. 344 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02622 650 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Pumo5g02622 650 Pfam Protein tyrosine and serine/threonine kinase 350 643 IPR001245 GO:0004672|GO:0006468
Pumo5g02622 650 Gene3D Phosphorylase Kinase; domain 1 329 426 - -
Pumo5g02622 650 SUPERFAMILY L domain-like 31 233 - -
Pumo5g02622 650 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Pumo5g02622 650 FunFam Leucine-rich repeat receptor-like protein kinase 145 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02622 Pumo-Chr5 72232945 72236767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02622 3 648 Receptor kinase-like Gene Family AT3G57830 58.974 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo5g02622 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02622 - - gmx:100796011 1113.98