Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02595 ATGAAGCTGGAAGGCTATTGTTGTGAGTTTAGCCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCACTAGATAAATATATAGATGATTGCACTCTTTGCAAGAGGCTAACTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCCTTTGTTATTTGCACACTGGTTGTAGGGAGTTTGTGAGCCATGGGAACTTAAAATGTGAGAATGTCATGTTGGATGAAAACTCAGTGGCCAAGGTGTGTGAATATGGGTTTGCAATAGTGGCTGGTGAGGCCACATATTGTGGCTTTTCAGCTGAGAAGGATGTGGGGGATTTTGGAAAGTTGGTGTTAACCTTGCTAACAGGGTGTCAAGATCATGAACAACTTTGTGAGTGGGCTTATACTGAATGGATGGAAGGGAGGGCAGTTAATGTGGTTGATAAAAGACTTGATGGTGTTGTCAATTCAGAGGAACTTGAACGTGCATTAAGGACCTCATTCTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCTATGGAGGAGGTAGTGAGAGTGCTAGATGGTACATTGAACGTTGATCCACCGCCGCCACCGTTTGTCTTGCACAGGCCGTTACAGGAAGATGATTCACAAGAAAATGGCTCAGAATAA 651 0.4286 MKLEGYCCEFSHRFLVYEYAKNGSLDKYIDDCTLCKRLTWRKRVEICSSVAKALCYLHTGCREFVSHGNLKCENVMLDENSVAKVCEYGFAIVAGEATYCGFSAEKDVGDFGKLVLTLLTGCQDHEQLCEWAYTEWMEGRAVNVVDKRLDGVVNSEELERALRTSFWCLQMDERRRPSMEEVVRVLDGTLNVDPPPPPFVLHRPLQEDDSQENGSE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02595 216 PANTHER OS07G0415500 PROTEIN 2 199 - -
Pumo5g02595 216 Pfam Protein tyrosine and serine/threonine kinase 2 94 IPR001245 GO:0004672|GO:0006468
Pumo5g02595 216 Gene3D Transferase(Phosphotransferase) domain 1 20 101 - -
Pumo5g02595 216 Gene3D Transferase(Phosphotransferase) domain 1 102 194 - -
Pumo5g02595 216 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 20 98 - -
Pumo5g02595 216 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02595 216 MobiDBLite consensus disorder prediction 194 216 - -
Pumo5g02595 216 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02595 216 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 99 194 - -
Pumo5g02595 216 SUPERFAMILY Protein kinase-like (PK-like) 2 206 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02595 Pumo-Chr5 71420551 71421201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02595 1 198 Receptor kinase-like Gene Family AT4G21230 30.973 6.29e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo5g02595 PK_Tyr_Ser-Thr 6.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02595 - - gmx:100809478 410.223