Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02590 ATGGGCAACTGCTGCGCGACGCCGTCGACGGACGAAACGACGAACAAGAAGGGCAAAAGGGGGAAAAAGGAGAACCCCTTCGCGATCGACTACGGCTTCAACGCCAACGCCAACGGCTCCAAGCTCACCGTCTTGAAGTCCCCGACGGGCCGGGAGATCGAGGCCAGCTACGTCCTGGGCCGCGAGCTGGGCCGGGGCGAGTTCGGGGTCACGTACCTCTGCACGGACAAGGAGACGGGAGAGGAACTCGCGTGCAAGTCGATTTCGAAGAAGAAGCTGAGGACCGCGATCGACATAGAGGACGTGAGGAGGGAGGTGGAGATCATGCGGCACTTGCCGCAGCACCCGAACATCGTGACCTTGAAGGATACCTATGAGGACGACAATGCCGTGCATCTCGTTATGGAGCTTTGTGAAGGCGGGGAACTCTTCGATCGCATCGTGGCGCGTGGCCACTACACCGAACGCGCCGCCGCCGCTGTCACCAAGACCATTGTGGAAGTCGTTCAGTTGTGCCACAAGCATGGTGTGATGCATCGGGATCTAAAGCCAGAGAACTTTTTGTTTGCAAATAAGAAGGAAACTGCGGCTCTGAAGGCTATAGATTTTGGGTTGTCAGTGTTCTTTAAACCAGGGGAAAGATTTAATGAGATAGTTGGAAGTCCTTATTACATGGCTCCCGAGGTATTGAAGCGAAATTATGGGCCAGAAGTGGATATCTGGAGTGCTGGAGTAATTCTATACATCTTACTTTGTGGTGTTCCACCATTCTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATCATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCTAAAGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTAGATCCTGACCCAAGGCGGCGGCTTTCTGCACAGGAAGTGTTAGATCATCCATGGTTACAAAATGCAAAGAAAGCTCCTAATGTTTCCCTAGGAGAAACTGTTAGAGCAAGGCTCAAGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTAAGGGTGATTGCCGAGCATTTGACAGGTAGAAGAAGCTGCCGGCCTAAAAGAGGGATTCCAGCTTATGGATACAAACAACAGAGGCAAGATTAA 1137 0.5075 MGNCCATPSTDETTNKKGKRGKKENPFAIDYGFNANANGSKLTVLKSPTGREIEASYVLGRELGRGEFGVTYLCTDKETGEELACKSISKKKLRTAIDIEDVRREVEIMRHLPQHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQLCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLDPDPRRRLSAQEVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLTGRRSCRPKRGIPAYGYKQQRQD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02590 378 Gene3D Phosphorylase Kinase; domain 1 58 143 - -
Pumo5g02590 378 MobiDBLite consensus disorder prediction 1 23 - -
Pumo5g02590 378 SUPERFAMILY Protein kinase-like (PK-like) 56 323 IPR011009 -
Pumo5g02590 378 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 356 - -
Pumo5g02590 378 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02590 378 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02590 378 CDD STKc_CAMK 57 314 - -
Pumo5g02590 378 FunFam Calcium-dependent protein kinase 1 59 142 - -
Pumo5g02590 378 Pfam Protein kinase domain 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02590 378 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Pumo5g02590 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pumo5g02590 378 FunFam calcium-dependent protein kinase 13 143 323 - -
Pumo5g02590 378 Gene3D Transferase(Phosphotransferase) domain 1 144 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02590 Pumo-Chr5 71364178 71368468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02590 1 375 EF-hand Containing Proteins AT3G57530 79.265 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo5g02590 Pkinase 3.9e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02590 K13412 - gmx:100790745 701.819