Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02573 ATGGCCGAATATTTTGTCTTCGATGTTGCTGAATCACTGCTAGGGAAGCTTGCTTCTTATGCTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATGAGGATCTGCAGGGGTTCAAAGACACTTTGTCAATTGTGAAAGGGGTGCTGTTGGATGCTGAGGAGAAGAAGGAGCACAAGCATGGGTTGCGCGAATGGCTCAAGCAGATTCAAAACGTATGCTTCGATGCTGAAGATGTATTGGATGGATTTGAGTGCCAAAACTCGCGAAAGCAAGTTGTCAAAGCTTCAGGCAGCACCAGGATGAAGGTAGGCCACTTCTTTTCTTCTTCTAATTCTCTTGTTTTCCGTCATAGGATGGCTCATCAAATCAAAGATGTTAGGGAAAGATTGGATAAGATAGCAGCTGATGGGATCAAGTTTGGTCTTGAGAGGATTGATGTTGACCTCAGACATGTGCAAAGGAGAGAAATGACATATTCCCATGTTGATGCTTCTGATGTGGTTGGAAGGGAGAGTGACAGGGAAGAGATTATCAACCTTTTGATGCAACCTCACCCTGATGGTGACGGGTATGGTGATAAAAGTCTGTGTGTTATTCCCATAGTGGGAATTGGAGGCTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGAACTTTTCCAATTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGGCAGATAATTATTAAAATTATCAACTCTGCTTCTGCTTCAGCTCCAACTGTTGCTCTTGCTCACCAAGAAAACATGAACAGCTTAGATATTGAGCAGCTGCAAAGTCGTCTTAGACACAAGCTTTCTGGTCAGAAGTTCTTGTTAGTCCTGGATGATATATGGAATGATGATTATGCAAAATGGATTGAGTTGAAAAATTTAATAAAAGTTGGCGAAAAAGGAAGCAAAATCATAGTGACAACACGAAGTAACTCAATTGCTTCAATGATGGGCACTATTCCCTCTTATATTTTAGAGGGCCTTTCTCCAGAGAATTGCTTATCCCTGTTTGTAAGATGGGCATTTAAGGAAGGTCATGAGAAGCAATATCCAAATCTAATGGAGATCGGAAAGGAAATTGTGAAAAAATGCCGAGGGGTTCCTTTGGCAGTGAGAAGCTTGGGAAGTTCTCTGTTCTCAACTTCTGATTTAGATAAATGGGAATTTGTGAGAGACCATGAGATATGGAATTTAAAACAAAAGAGAGACGACATTTTACCTGCACTTAAGTTGAGCTATGATCAAATGCCATCCCATTTGAGGCACTGTTTTGCTTACTTTTCCCTTTTTCCCAAAGATTTTCGCTTTATTAATACTGAAATTACTAATCTTTGGGCGTCACTTGGACTACTTCAATCCCCGGACAGAAGTCAAAAGGTAGAGAATATTGCAAGACAATATATAGAAGAGTTGCATTCAAGATCATTTCTTCAGGATTTCACAGATTTTGGCCTCTTCTATTTTTTCAATGTACACGATTTGGTGCATGATCTTGCACTGTATGTTGCGAAAGAAGAGTTTCTGATGGTAGATTCCCGTACTCGGAATATTCCTGAGCAAATAAGGCACATATCAATTGTTGAAAATGATTCACTTGACCATGCTTTGTTCCCCAAATCCAGAAGTCTGAGAACAATCATTTTTCCCATTGAAGGAGTGGGTCTTGGCAGTGAAATTCTTTTGGAGACATGGGTATCAAGATACAGATACTTACGGGTCTTAGATTTAAGTGATTCTTCTTTTGAGACTCTGCCTAATTCAATTGCTAAATTGGAGCATCTGCGAGTTCTCGATCTTTCTAATAACCGCAAAATCAAAAGACTTCCTCATTCTATTTGCAAACTCCAGAATTTGCAAGTTTTTTCAGTCAGCGGATGCATGGAGCTTGAAGCATTGCCTAAAGGATTTGGGATGTTGATGAACCTTCAAGAACTGAAAATAACCACAAAGCAATCTTTTGTGTCACAGGATGAATTTGCAAAGTTGAGCAACCTACAAACCTTGAGTTTTGAATATTGCGTCAATTTGAAGTATTTGTTGGAAAAGGCACAAATCACTCAACTCAGTTCCCTTCAAATATTGGTTGTTAGATCATGCGGGAGCCTAAAGACCTTACCTCTTTATATTCTCCCTAAACTAGACGCTCTGTTTGTTGCGGACTGTGGGATGTTAAATTTGTTGTTGGACGACGAAAGCCTAATCAAAAGATTGAAAATGAAATTTCTGCATGTAGAGAATTTTCCGGGGCTAACTAGACTTCCTGGATGGATCGAAGGAGTTGCAGATACTTTAGAGACCTTGATGATTTATAATTTGCCTAAACTTGTGATGCTTCCTGAGTTTTTACCTAGAATGACTCATCTTAAGAGGCTCCATGTTGCTGAATGTCGTTCACTGTTGTTTCCTCAAAGTCACATGCATTACCTCACTACCCTTGAAGATTTGAGCGTAGATGGTTGTCCTGCATGGGACTATGTACGTGACAAGCTACATTTAAGTGACAACAAAACAAAGTAA 2559 0.3994 MAEYFVFDVAESLLGKLASYAYEEASRAYGVYEDLQGFKDTLSIVKGVLLDAEEKKEHKHGLREWLKQIQNVCFDAEDVLDGFECQNSRKQVVKASGSTRMKVGHFFSSSNSLVFRHRMAHQIKDVRERLDKIAADGIKFGLERIDVDLRHVQRREMTYSHVDASDVVGRESDREEIINLLMQPHPDGDGYGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDELFQLKMWVCISDDFDIRQIIIKIINSASASAPTVALAHQENMNSLDIEQLQSRLRHKLSGQKFLLVLDDIWNDDYAKWIELKNLIKVGEKGSKIIVTTRSNSIASMMGTIPSYILEGLSPENCLSLFVRWAFKEGHEKQYPNLMEIGKEIVKKCRGVPLAVRSLGSSLFSTSDLDKWEFVRDHEIWNLKQKRDDILPALKLSYDQMPSHLRHCFAYFSLFPKDFRFINTEITNLWASLGLLQSPDRSQKVENIARQYIEELHSRSFLQDFTDFGLFYFFNVHDLVHDLALYVAKEEFLMVDSRTRNIPEQIRHISIVENDSLDHALFPKSRSLRTIIFPIEGVGLGSEILLETWVSRYRYLRVLDLSDSSFETLPNSIAKLEHLRVLDLSNNRKIKRLPHSICKLQNLQVFSVSGCMELEALPKGFGMLMNLQELKITTKQSFVSQDEFAKLSNLQTLSFEYCVNLKYLLEKAQITQLSSLQILVVRSCGSLKTLPLYILPKLDALFVADCGMLNLLLDDESLIKRLKMKFLHVENFPGLTRLPGWIEGVADTLETLMIYNLPKLVMLPEFLPRMTHLKRLHVAECRSLLFPQSHMHYLTTLEDLSVDGCPAWDYVRDKLHLSDNKTK 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02573 852 Gene3D Ribonuclease Inhibitor 526 852 IPR032675 -
Pumo5g02573 852 SUPERFAMILY L domain-like 505 836 - -
Pumo5g02573 852 Pfam Rx N-terminal domain 10 100 IPR041118 -
Pumo5g02573 852 PANTHER DISEASE RESISTANCE PROTEIN RP 63 807 IPR044974 GO:0006952
Pumo5g02573 852 FunFam Probable disease resistance protein At1g61300 150 334 - -
Pumo5g02573 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 440 IPR027417 -
Pumo5g02573 852 Gene3D - 10 124 - -
Pumo5g02573 852 Gene3D - 426 515 IPR036388 -
Pumo5g02573 852 Gene3D - 150 335 IPR027417 -
Pumo5g02573 852 ProSiteProfiles Leucine-rich repeat profile. 607 629 IPR001611 GO:0005515
Pumo5g02573 852 Pfam Leucine rich repeat 584 640 IPR001611 GO:0005515
Pumo5g02573 852 CDD RX-CC_like 12 134 IPR038005 -
Pumo5g02573 852 Gene3D - 341 425 IPR042197 -
Pumo5g02573 852 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Pumo5g02573 852 PRINTS Disease resistance protein signature 198 213 - -
Pumo5g02573 852 PRINTS Disease resistance protein signature 281 295 - -
Pumo5g02573 852 PRINTS Disease resistance protein signature 603 619 - -
Pumo5g02573 852 PRINTS Disease resistance protein signature 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02573 Pumo-Chr5 70819292 70822928 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02573 199 841 WRKY Transcription Factor Family AT5G45050 21.973 3.30e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02573 - - gmx:100796004 1465.67