Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02571 ATGCAGCAGAATCCTAATGATGATCATGATCATACAAGTCTCTCTGTTATCCCCATTGTGGGGATGGGAGGCTTGGGAAAAACTACACTTGCAAAGTTTGTGTTCAATGACAAGAGGATAGATGAGTGTTTTCCGTTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAGCAACTCATTATCAAAATCATCAATTCTGCCAATAATTTTGCTGCTGCTGATGCTCCTCCTCTCCAACTCCAACAGAATTTAAACAAGTTTGATCTGGAGCAACTGCAAAATCAATTGACAAACAAACTAGCCGGTCAAAAATTCTTACTCGTCTTGGACGACGTATGGAATGATGACCATGTTAAATGGGTTGAGCTGATGAATTTAATACAAGCAGGGGCTGTTGCAGGAAGTAAAATTGTAGTGACTACACGTAGTCATTCCATTGCTTCCATGATAGGCACCGTTCCCTCTCACAATTTAGAAGGCCTTTCCCTGGAGGATTCATTGTCTCTTTTTGTTAAATGGGCATTTAATGAAGGAGATGAGGAAAAACATCCTCATTTGGTAAATATTGGGAAAGAAATTGTGAAAAAATGCAGAGGGGTTCCACTGGCTGTGAGAACATTAGGGAGTTTACTATTTTCAAAATTTGAGGCAAATGAGTGGGAATATGTGAGAGACAATGAGATTTGGAATTTGCCACAGAAAAAAGATGACATTCTACCTGCACTTAAATTAAGTTATGATCTCCTGCCCTCCTATTTGAGGCAATGTTTTGCATTGTTTTCCCTTTACCCGAAGGATCATGAATTCAATAGTTTTGAGGTAGCTATGCTTTGGGGGGCACTTGGTCTCCTTGCATCACCTAGAAAGAATGAGACACCGGAAGATGTTGCCAAACAGTATCTGTATGAACTACTGTCAAGATCTTTCCTTCAAGAATTTGGGAACATGGGCACTATTTATGTATTTAAAATGCATGATTTGGTGCATGATCTTGCTCTATTTGTTGGAAAAGATGAGTGTCTACATATACATTCCCACATTCAAAATATTCCTGAGAATGTTCGGCATCTATCTTTTGCTGAATACAATTTTCTTGACAATTCATTCACCACAAATTCGGTAGCTGTGAGAACCATACTGTTTCCAAATGGTGCAATAGGAGTCAACGTTGAAGCTTTACCAATTACTTGTGTGTCAAAGTTCAAATTTTTGCGAGTTTTGGATTTAAGTTATTCGGCATGCAAGACTTTGCCACGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTATGAATAATGACAACATCAAGAAACTCCCCAATTCTATTTGCAAGCTCCAAAATTTGCAAGTGTTGAAACTCGATGGATGCGAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATCAGTCTCCGGCATTTGGAGATAACCACAAAGCAACCTGTTTTGCCTTACAATGAGATTACCAACTTGAGCTCACTTGCATTTCTGTTAATTGAATCAAGCCATAATCTGGAAATATGTTTTTCCGGATATAGCTTTGGTTACAGCTATTAG 1575 0.3867 MQQNPNDDHDHTSLSVIPIVGMGGLGKTTLAKFVFNDKRIDECFPLKMWVCVSDDFDIKQLIIKIINSANNFAAADAPPLQLQQNLNKFDLEQLQNQLTNKLAGQKFLLVLDDVWNDDHVKWVELMNLIQAGAVAGSKIVVTTRSHSIASMIGTVPSHNLEGLSLEDSLSLFVKWAFNEGDEEKHPHLVNIGKEIVKKCRGVPLAVRTLGSLLFSKFEANEWEYVRDNEIWNLPQKKDDILPALKLSYDLLPSYLRQCFALFSLYPKDHEFNSFEVAMLWGALGLLASPRKNETPEDVAKQYLYELLSRSFLQEFGNMGTIYVFKMHDLVHDLALFVGKDECLHIHSHIQNIPENVRHLSFAEYNFLDNSFTTNSVAVRTILFPNGAIGVNVEALPITCVSKFKFLRVLDLSYSACKTLPRSIGKLKHLRYFSIMNNDNIKKLPNSICKLQNLQVLKLDGCEELEALPKGLRKLISLRHLEITTKQPVLPYNEITNLSSLAFLLIESSHNLEICFSGYSFGYSY 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02571 524 Gene3D - 162 246 IPR042197 -
Pumo5g02571 524 Gene3D Ribonuclease Inhibitor 338 518 IPR032675 -
Pumo5g02571 524 Gene3D - 2 155 IPR027417 -
Pumo5g02571 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 261 IPR027417 -
Pumo5g02571 524 SUPERFAMILY L domain-like 325 508 - -
Pumo5g02571 524 PRINTS Disease resistance protein signature 16 31 - -
Pumo5g02571 524 PRINTS Disease resistance protein signature 448 464 - -
Pumo5g02571 524 PRINTS Disease resistance protein signature 101 115 - -
Pumo5g02571 524 PRINTS Disease resistance protein signature 199 213 - -
Pumo5g02571 524 PANTHER DISEASE RESISTANCE PROTEIN RP 15 500 IPR044974 GO:0006952
Pumo5g02571 524 Pfam NB-ARC domain 12 249 IPR002182 GO:0043531
Pumo5g02571 524 Gene3D - 247 335 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02571 Pumo-Chr5 70690814 70692388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02571 417 510 WRKY Transcription Factor Family AT4G12020 35.417 2.09e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02571 - - gmx:100777049 804.668