Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02560 ATGGCGCCAAAACGAAAACCTTCGTCTCCAATCTCCATCGGTAACTGCGAGATTACGATCGACGCCAACCGCTTCGCCTGCAACTCCGATTCAAACGGCGTCGTAATCTCTCTTCCCCGAAGCGGAATGATCAAAGTATCAGCAGTGGCTGCAAACCGTGGAAGCGCTTCTGAGGATTTTAGGTCCGGTGATAAAGAACACGAGTTCGTGCTAGTTAATCCTAAAGATGTTGATGCTATTAGCAAATCCTACCTTCAGGAAGTATTACAGATGTATACGACAGAGCTACCTGGAATGAATTATGCTGCGAATACGGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGTACACTACTTATCAAATCCACTTCTGTTGGAATTTCAGGAAAGGTTATAGCTGCAATTACGTACCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTGCAGCCGTCAATGCAATCTATCAACGAAAGGGTTTTGGTCATCTATTGTTTCTAGAGCTAAGGAAGAGACTTCAAAGTGTTGGTGTTCGTTCTATTTTATGTTGGGGGGACAAAGAATCAGAAAGATTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGGTACCAAAGGAAGGGCCCGCAGGTTACCCGTAAAAGCTGATATTCAAAAATCATTATGCTTTCTTGGTGGTTCAACTCTCATGGTTTGCCACCTAGGGAAAGAATTCTTAGCTGATGATGCTAACACTGTGAAGTATCTCCCCTCACAGTTTCATCAGAATTCCTTTCCATCTGCCATTGCTGAAGATGAGCAGCTTGAATTTTCAGGAAAGTTACATGTAGATTTGAAATTTCCAGATAAATCTTCCCATAGAACAGAATCAGGTAAAAATCAACATGAAGCTTTGGTGAAAGATGGATCTTCAACAGAATATGACAAACTCAGTGGATTTGACAGTCACAATGCTAAGGAATGCTGCAGTGGCATTGCTCCTTTTACCAGAGTAAATGATGATAGACAGGCCAGTGCAGAAAGTTCACAGGATGGAATTGATGCTAATGTGAAGTATTGTTCTCAATCTACAAAAGGTGCAAAGAGGGCCTGGGAAGCCTCTTTATCCTCATTGAAATCAAAAAGGGTGAAGGGGAGCCAGATGGTTGACTATCAACCAGATTCTAGCTGCGGTTTTATCTTAGAGACTGATAAGGCCAATCCTTGTTTTGAAGAAGTCCCTCATGATCCTTCAATTACAAAATGTTCTGAAAAATCTATCGGGGATTATTTGCATTTAGAAGCTCCCATCAACATAGACTCGCCATCAACTAAACAAAGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTTACAAAGGTGATTGAAGACCTTGGTGGAACTATATCCTGTGATGGTAGTATGACCACACACATTGTCACAGGAAAAGTGAGGAAGACTCTGAATTTCTGTACCGCCCTCTGTTCAGGTGCTTGGGTGATCTCATCAAGTTGGTTAAAAGAAAGTTTTCGTGAAGGCAGATTTGTTGATGAACTGCCTCACATACTGAATGATACAGATTATCTGCTGAAGTACAAATCTGATTTAAAAAGTGCAGTTCTCCGGGCAAAAGCTAGCCCTCATACTTTGTTTAAGGGTTATAATATATGTATTGCAGCTCATGTTCAAACTCCTGCTAAAATATTGTCTGCAGTTGTCAGGTCCGCAGGTGGTAATGTAAGTCCTATTCTTTTTGTCAACTGA 1791 0.4104 MAPKRKPSSPISIGNCEITIDANRFACNSDSNGVVISLPRSGMIKVSAVAANRGSASEDFRSGDKEHEFVLVNPKDVDAISKSYLQEVLQMYTTELPGMNYAANTGKQSKFLERCVTNGKYRTLLIKSTSVGISGKVIAAITYQIIPADTEYAEIPLAAVNAIYQRKGFGHLLFLELRKRLQSVGVRSILCWGDKESERFWLKQGFVEIAQVGTKGRARRLPVKADIQKSLCFLGGSTLMVCHLGKEFLADDANTVKYLPSQFHQNSFPSAIAEDEQLEFSGKLHVDLKFPDKSSHRTESGKNQHEALVKDGSSTEYDKLSGFDSHNAKECCSGIAPFTRVNDDRQASAESSQDGIDANVKYCSQSTKGAKRAWEASLSSLKSKRVKGSQMVDYQPDSSCGFILETDKANPCFEEVPHDPSITKCSEKSIGDYLHLEAPINIDSPSTKQSFRIMLMNIADDAKKTQLTKVIEDLGGTISCDGSMTTHIVTGKVRKTLNFCTALCSGAWVISSSWLKESFREGRFVDELPHILNDTDYLLKYKSDLKSAVLRAKASPHTLFKGYNICIAAHVQTPAKILSAVVRSAGGNVSPILFVN 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02560 596 Gene3D BRCT domain 441 556 IPR036420 -
Pumo5g02560 596 Gene3D - 66 219 - -
Pumo5g02560 596 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 211 IPR016181 -
Pumo5g02560 596 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 61 284 - -
Pumo5g02560 596 SMART BRCT_7 445 522 IPR001357 -
Pumo5g02560 596 Pfam Acetyltransferase (GNAT) family 133 206 IPR000182 GO:0016747
Pumo5g02560 596 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 446 530 IPR001357 -
Pumo5g02560 596 CDD NAT_SF 135 192 - -
Pumo5g02560 596 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 75 226 IPR000182 GO:0016747
Pumo5g02560 596 ProSiteProfiles BRCT domain profile. 443 532 IPR001357 -
Pumo5g02560 596 SUPERFAMILY BRCT domain 451 534 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo5g02560 RTT107_BRCT_5 2.8e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02560 - - gmx:100806087 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02560 5 70368991 70374126 Pumo5g02560 5 70368991 70374126 ECH