Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02550 ATGAAGATTGAAATTGAAGGCAGCCACAGTGATTATGCTGAATCTCAGAGAGTGTCTGGAACAGATGAATCTGTTTTCAGCCAACCAGAAAACAGAAGATTGGAATCCAAGAAGAAATTGAAGAAAGTGAGGTCTATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATCCACCAGAGGAGGGAGACCCCAACATGATTATCTCTCCATTCTCTCATCTGTTGACACAGAAAGTTTAGAGGGGCCAACACCACTTGACATGGCAGATGCATCGCCCAATTACATGAAGGCTACCAGCAGTTCTCACGCAAAGGATAGTTTTCAGAATACACAAAGACTATTATTCACAAAGAAGACTTTGACAAGAGTGTCTACTTTGAAACTGAAGAGGAGTATGACCAGAAAGTTATCTGGAAGGACTGAACCAAAGAGGAAATTGAAGTCCTCAAGATCAATCAAGTTTGCAACTGTCAAGGGCCAAAAGTCAGACCAGAATTGGAAAAGTGCAAGTGATGCTGGTAACAAACCCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATGCCCACTTTCAAATCAAAGAATTCTTCCATAGAGAGAGGCCATCAGATATCTCAATCCCCAGACACAAGCTTGCATAGAGCCACTTGTTCTTCTGCTCTCAAGGATTCCCATTTTCCTGATCACATTGACCTCCCTCAAGATGGAAGTGACTCTCAAGGAGTATCAGCTGTGAAGGTTTGTCCATATTCTTACTGCTCTCTTCATGGTCACCGCCATGCCAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGCGGCGCGCGTTGAAGAGCCAAAAGCCAATGAAAATGGATCGTCAACCTGTTACAAGATCAAAGCAGATTGGTAATGCAAGGAAAGCCACTCAGAAATCTCAAACTGTCCACAGTGAAGATGGCAGATCTCATTTTGAGAATAAGAAAAAGCCGGCAAGGGGCTTATGGATTAGGCCTCATGGCACTCCAACATCCACAGTTACTGAAGGTGTGGAATCAAGATCAACAGGTGGAGTCAAGTTTTCTGCTCCTGATACTGAGATATTGGAGGGAGAAGTAACCAACACTGGCAACACAGACAAAAATATGGAGCTGGATTATGAAGTACTGAAGGTGAGTTCTGTACAGAAAGAGTCTACACATGCTAGCACTACTGATATGGCAAGGGGAATGCAGGAAAGAGATAAAAAATATGTCAAAATGTGGCAGTTGATGTATAAGCATGCTGTATTGAGTAACACAGAGAAATGTGAAAATAAGCAGCCCTTTGATGAGAAGGACAAGGAAGGAAGAGAGCAAGATTCCCTTGCAACTGATGAAGTGAACATTTCTTCTTGTCGCGATGATTGCAATACAGATCAGGATATGGATGATGAAAATAAGAATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATTCTTCTCCCAGAGCCTGAAGACCTCTTTTCTGATGATCAATTTAAATCTGAAGGCATTGATTCAGATGAGGTACACTTAGAAAAGAGTGAAGCTGAGAGAGAAAGGAATACCTCAACATCCACAGAATTTCCAATAGCACAGAGGATGGGGACCAAACCTGACCAAAGAGCACCAAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCATGAAAAGGTTTGTGAAGGCGTTAGAGAAGGTAAGAAACATCAATCCTCAAAGACCAAGACGTTTTCCTTCTGATGCTAACTTAGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAAAAGAATGCTGAGGAATGGATGCTTGATTATGCAATTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACAAAAAGTGACACTTCTAGTAAAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGAAAATAGGCCATGGTTTTCTGCAACGATGGAACCTCAAGCAAATCCAGTTCAACCCCTTGATAATTCCTCAAATCATAGCGAGGAAGAAACATCATTTTCTCATGATAGTAGTATGGAGCTGGCAGATAATGCTAGTGATGATCCAATGCCAGAACTGCACAATCCTACTACACTCAAAGAAAGATGTCTTGACTATCCTGGAACTGAGACAGTCAAGAATATGCCTGCAGTTGGAGCTTCTGAAGAAGACTTGAGTGGAAAGCAAAGTTTAGCTGGCAGTTATGATAATGGGGAGAAGATATCAAGTGACAATGATAATATTTATCTTGGAGAGATCAAAGATACGACATCAAGTTCCTTAAATGAGCCAGTTGAAATTAAAAGCGGTCATGAGGAGGCTCCAACCAATGAAATAGTCAATGATGTTCCAAAAGATTTGCTATGCAGTGTGAATACAGAAAATCCACATATCAAATCTGAGTCACCTTCAAGAGATGTTGAAACCAAGAATCTGAATGGTGATAATGGGGAACAATTTTCCGTGTCCAAAAGTTTAGTCTTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCTGCAAACCTATTAGATGAATCAACAGCCGACAGAAAAGAAGGAATTGAAAAGGTTGAGCCGGAAACTGAGACTCTTGAAGAGTTCCCTACAAAGAAACAATCTGAAGCTCCTATGAGTGCTATTGTAGAACCTGAGACCCCTGTAGAGAAACAGAACAGCACAGGATTGTGGTACTTGGTGTATAAGCACATGGTATCAAATATGGCTGAAAGCAATTCCGAGTCACTAATTGATGGGGCAGATGAGAAAGAGTCAGCGATTGATGGCAGCAGAACAAGAGGAACTTCCATCGCTTATGAAAGTACACCTGTGACTGATCAAGAGATGCAATTCAAGGACCATGTTGTAGCTGATCCAGAAGTTGCACGCCAACAGATTGAAGCCATCAAGATGGTAGAGGAAGCAATTGATTCAATTCTTCCAGATGACTTAGCAGACAAGGAGTCACTCACTGACAACACCATTTCAGACAACTCCAAACAATCTGACAGAACTGAAATAGTGAACGGTGAAGGCCTGAACCAAAAAGAAGAAAAGATGGAATCCGGAAATGGAATAATCCAAGAACAAGAAGAATCAGCACCAAAGGAGCAAAACAAAACAAACCAGCCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGACCCAGATATCTACCTGTAGAGCCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAAAGAAAAGTGGAGCTGTTAGTGGAAGCTTTTGAAACAGTCGTGCCAACCATAAAAAATTGA 3474 0.4119 MKIEIEGSHSDYAESQRVSGTDESVFSQPENRRLESKKKLKKVRSIRLVRLPSKRSSTRGGRPQHDYLSILSSVDTESLEGPTPLDMADASPNYMKATSSSHAKDSFQNTQRLLFTKKTLTRVSTLKLKRSMTRKLSGRTEPKRKLKSSRSIKFATVKGQKSDQNWKSASDAGNKPQRVITRRLSLKPVRILAKMPTFKSKNSSIERGHQISQSPDTSLHRATCSSALKDSHFPDHIDLPQDGSDSQGVSAVKVCPYSYCSLHGHRHANLPPLKRFVSMRRRALKSQKPMKMDRQPVTRSKQIGNARKATQKSQTVHSEDGRSHFENKKKPARGLWIRPHGTPTSTVTEGVESRSTGGVKFSAPDTEILEGEVTNTGNTDKNMELDYEVLKVSSVQKESTHASTTDMARGMQERDKKYVKMWQLMYKHAVLSNTEKCENKQPFDEKDKEGREQDSLATDEVNISSCRDDCNTDQDMDDENKNAIELVQKAFDEILLPEPEDLFSDDQFKSEGIDSDEVHLEKSEAERERNTSTSTEFPIAQRMGTKPDQRAPKSWSNLKKLILMKRFVKALEKVRNINPQRPRRFPSDANLEMEKVFLKHQTAEEKKNAEEWMLDYAIQKVISKLAPAQRQKVTLLVKAFETILPFQDAENRPWFSATMEPQANPVQPLDNSSNHSEEETSFSHDSSMELADNASDDPMPELHNPTTLKERCLDYPGTETVKNMPAVGASEEDLSGKQSLAGSYDNGEKISSDNDNIYLGEIKDTTSSSLNEPVEIKSGHEEAPTNEIVNDVPKDLLCSVNTENPHIKSESPSRDVETKNLNGDNGEQFSVSKSLVLEGLVRSLRSNLIGSGAPANLLDESTADRKEGIEKVEPETETLEEFPTKKQSEAPMSAIVEPETPVEKQNSTGLWYLVYKHMVSNMAESNSESLIDGADEKESAIDGSRTRGTSIAYESTPVTDQEMQFKDHVVADPEVARQQIEAIKMVEEAIDSILPDDLADKESLTDNTISDNSKQSDRTEIVNGEGLNQKEEKMESGNGIIQEQEESAPKEQNKTNQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPVEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVVPTIKN 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 513 535 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 134 148 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 661 700 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 438 456 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 1005 1023 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 437 472 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 661 676 - -
Pumo5g02550 1157 SMART CaM_binding_2 1030 1153 IPR012417 GO:0005516
Pumo5g02550 1157 SMART CaM_binding_2 531 645 IPR012417 GO:0005516
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 1 68 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 200 219 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 513 531 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 1003 1039 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 860 884 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 313 333 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 1024 1039 - -
Pumo5g02550 1157 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 21 327 IPR044681 GO:0005516
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 133 152 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 803 827 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 929 948 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 12 27 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 341 355 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 284 362 - -
Pumo5g02550 1157 Pfam Plant calmodulin-binding domain 545 645 IPR012417 GO:0005516
Pumo5g02550 1157 Pfam Plant calmodulin-binding domain 1048 1153 IPR012417 GO:0005516
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 298 312 - -
Pumo5g02550 1157 MobiDBLite consensus disorder prediction 855 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02550 Pumo-Chr5 70209776 70214372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02550 553 648 Calmodulin-binding Proteins AT5G04020 50.000 7.74e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02550 - - gmx:100804484 1919.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02550 5 70209776 70214372 Pumo5g02550 5 70209776 70214372 ECH