Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g02530 | ATGTCCCTTGAAGAGTCGCTAAGATCTCTTTCCCTTGATTACCTCAACCTCCTCATCAACGGCCAGGCCTTCAGCGACGTCACTTTCAGCGTGGAGGGGCGCCTGGTCCACGCGCACCGCTGCATACTCGCGGCCAGGAGCCTCTTCTTCAGGAAATTCTTCTGTGGGCCGGACCCCCCGTCCGGCCTCGACCCCGCCGGCCCGCGAGTTCCTAACTCGCGGTCCGGGGTCATCCCCGTCAACTCGGTGGGCTATGAGGTGTTCCTCCTCATGCTCCAGTTTCTCTACAGTGGCCAGGTCTCCATCGTCCCTCAGAAGCACGAGGCCCGGCCCAATTGCAGCGAGCGCGGCTGCTGGCACACGCATTGCACCTCCGCCGTTGTTCTCGCCCTCGACACCCTCGCCGCCGCTAGATACTTCGGCGTCGAACAGCTCGCATTGCTCACTCAGAAACAACTTGCGAGCATGGTAGAGAAGGCTTCCATAGAGGATGTAATGAAAGTGCTGTTGGCATCAAGAAAGCAAGACATGCAGCAACTATGGGCCACTTGTTCTCACTTGGTGGCAAAATCGGGTCTCCCTCCCGAGGTTCTCGCCAAGCACCTCCCAATAGACATTGTGGCGAAGATCGAAGAGCTTCGTCTCAAATCCTCCCTGGCACGCCGCTCATTGGTGCCTTCTCACCACCACCATCACCACCACCACCACGCGGCCCTCGACCTCGAGGACCAGAAAATCCGACGAATGAGGCGGGCCTTGGACTCCTCCGATGTGGAACTCGTGAAGCTCATGGTAATGGGAGAGGGCCTTAACTTAGATGAGGCACTGGCCTTACCCTATGCGGTGGAGAATTGCAGCAGAGAAGTGGTGAAGGCCTTGCTTGAGCTCGGTGCAGCCGATGTCAACTACCCTTCCGGCCCCGCGGGGAAGACGCCGCTGCACATTGCGGCGGAGATGGTGTCCCCCGACATGGTGGCGGTGCTGCTGGACCACCACGCGGACCCGAACGTGAGAACCGTTGATGGGGTCACCCCTTTGGACATCCTCAGAACCCTAACCTCGGATTTCCTCTTCAAGGGTGCTGTCCCCGGATTGACCCACATCGAACCCAACAAGCTGAGGCTGTGCTTGGAGCTCGTTCAATCCGCTGCTCTTGTCATGTCGCGAGAAGAAGGAAATGCTAATAACAACAATGCTCCTAATTCTTCGACAGCACCCATTTACCCTCCTCCAATGAACGAGGATCACAACAACAGCAGCAGCAGCAGCGGCAACAACAACAACAACAACATTGGTAACCTCAACTTGGATTCGAGGTTGGTGTATCTCAACCTTGGTGCCACCGCTTCAATGAGTTCAAGGTTAGACGGTGCTGAGGACGAGAGAGAAGCCATGAACCAAACCATGTACCACCACCACTCTCATGACTTCTAG | 1434 | 0.569 | MSLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPAGPRVPNSRSGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEARPNCSERGCWHTHCTSAVVLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMQQLWATCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRLKSSLARRSLVPSHHHHHHHHHAALDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNYPSGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNANNNNAPNSSTAPIYPPPMNEDHNNSSSSSGNNNNNNIGNLNLDSRLVYLNLGATASMSSRLDGAEDEREAMNQTMYHHHSHDF | 477 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g02530 | 477 | MobiDBLite | consensus disorder prediction | 392 | 431 | - | - | |
Pumo5g02530 | 477 | Gene3D | - | 233 | 356 | IPR036770 | - | |
Pumo5g02530 | 477 | FunFam | regulatory protein NPR5 isoform X1 | 4 | 190 | - | - | |
Pumo5g02530 | 477 | ProSiteProfiles | Ankyrin repeat profile. | 308 | 340 | IPR002110 | GO:0005515 | |
Pumo5g02530 | 477 | SMART | BTB_4 | 25 | 157 | IPR000210 | GO:0005515 | |
Pumo5g02530 | 477 | Gene3D | Potassium Channel Kv1.1; Chain A | 3 | 190 | IPR011333 | - | |
Pumo5g02530 | 477 | PANTHER | BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 | 1 | 469 | IPR044284 | GO:0099402 | |
Pumo5g02530 | 477 | Pfam | BTB/POZ domain | 16 | 106 | IPR000210 | GO:0005515 | |
Pumo5g02530 | 477 | SUPERFAMILY | POZ domain | 9 | 155 | IPR011333 | - | |
Pumo5g02530 | 477 | Pfam | Domain of unknown function (DUF3420) | 192 | 250 | IPR024228 | - | |
Pumo5g02530 | 477 | MobiDBLite | consensus disorder prediction | 413 | 431 | - | - | |
Pumo5g02530 | 477 | CDD | BTB_POZ_NPR_plant | 8 | 157 | - | - | |
Pumo5g02530 | 477 | ProSiteProfiles | BTB domain profile. | 25 | 104 | IPR000210 | GO:0005515 | |
Pumo5g02530 | 477 | ProSiteProfiles | Ankyrin repeat region circular profile. | 308 | 338 | - | - | |
Pumo5g02530 | 477 | SUPERFAMILY | Ankyrin repeat | 267 | 351 | IPR036770 | - | |
Pumo5g02530 | 477 | SMART | ANK_2a | 273 | 303 | IPR002110 | GO:0005515 | |
Pumo5g02530 | 477 | SMART | ANK_2a | 308 | 337 | IPR002110 | GO:0005515 | |
Pumo5g02530 | 477 | FunFam | regulatory protein NPR5 isoform X2 | 239 | 356 | - | - | |
Pumo5g02530 | 477 | Pfam | Ankyrin repeats (3 copies) | 256 | 338 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g02530 | Pumo-Chr5 | 69837854 | 69841337 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Pumo5g02530 | BTB | 5.2e-15 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g02530 | K14508 | - | gmx:100816086 | 811.601 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo5g02530 | 5 | 69837854 | 69841337 | Pumo5g02530 | 5 | 69837854 | 69841337 | ECH |