Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02525 ATGGCTAAGAATGAGAACAAGGAAAAAGATCCTGAGTTTTTCATGGATCATTTCGTTGAGGACGCGAATGAAGAAGATCATGACATAGAAGCTGTCGAGTACAAGAGTGACAATAGTAATCAGTGTGACAGTGACAATGAGGGGAACCGTAGAACAGGACCTCATTCTTCCTCTTCTCAGCAATGGCCTCAAAGTTACAGAGAAGCCACTGATTCTTACTCAATTTCTGCTGCCCCAACTCTTGGATCAATTATACGAGCACCGAGTGTTATTTATTCAAGCTTTGTCGGTGGTGGTGTTGGTATTGGTTCAAAGAGTTACTTGGAACACAATGAGAGGACTTCTTTTCTATCTGGTGAGGAACTCCATAATCAGTTTCAAGAAGGGATCGCAAGAAGACAGTCAACATGGTGGGGGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAATTACCTATTGGTTATGGATGTAGCCTCACCCAAACAATATTTAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCTTATACAGTGAAGCAAGCTGGGTGGGCGGGTTTGATTGTGATGCTTTTTTTCGCGCTTGTATGTTGTTATACAGCAGACCTTATGAGACACTGCTTTGAAAGCAGAGAAGGGATAATTAGCTATCCAGATATAGGACAAGCTGCATTTGGAAGATATGGCCGACTTATTGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAGTTTATCATCTTGGAAGGAGATAACCTCACCAGGCTGTTTCCTGGAACATCCTTACACTGGGGCAGTTTCCAGTTGAACTCCAAACACTTGTTTGGAATTTTAACTGCACTTGTTATTCTCCCAACAGTTTGGTTGAAGGATCTTCGCATAATCTCCTATCTCTCAGCTGGAGGGGTTGTTGCCACAGCATTGATTACTATGTGTGTGTTTTTGGTTGGGACAACAGATTCTGTTGGATTCCATCTCTCTGGTCCATTGGTGAATTGGAGTGGCATGCCCTTTGCTTTTGGTATCTACGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAACATTTATCAGTCTATGGCTGACAAGAGAGAATTTACCAAGGCAGTGATTGCAAGTTTTATTTTATGCGTATTCATATATGGAAGTGTTGCAGTCATGGGATATCTCATGTTTGGTGAAGGGACTTTGTCTCAGATAACATTGAATCTACCACCAGATGCATTTGCTTCCAAAGTTGCCTTGTGGACAATAGTAAGATTTTTTGTCTTTTCTTTAATTTTAAACAAATATGCTTTGATGATGAACCCACTGGCAAGGAGTGTTGAGGAGTTGCTGCCGGAGAGCATTTCAAGGCTTGTGATGGCTTTAATTGGTTCTCTCCTCAGCGTACTAGTGGCAGTGATAATGCCTGCTTTATGTTTTCTGAAAATTGTGGGGAAAAATGCAACAAGTATACAGGTTACTCTTAGCGTCGTAATTGCCGCATGCGGAATCACTAGTGCTTTGATTGGAACATATTCATCTCTATCAAAAATTGTGCAGACTGAGAGTCACTGA 1578 0.41 MAKNENKEKDPEFFMDHFVEDANEEDHDIEAVEYKSDNSNQCDSDNEGNRRTGPHSSSSQQWPQSYREATDSYSISAAPTLGSIIRAPSVIYSSFVGGGVGIGSKSYLEHNERTSFLSGEELHNQFQEGIARRQSTWWGKASIQMQIPEELPIGYGCSLTQTIFNGINVMAGVGLLSTPYTVKQAGWAGLIVMLFFALVCCYTADLMRHCFESREGIISYPDIGQAAFGRYGRLIVSIILYTELYSYCVEFIILEGDNLTRLFPGTSLHWGSFQLNSKHLFGILTALVILPTVWLKDLRIISYLSAGGVVATALITMCVFLVGTTDSVGFHLSGPLVNWSGMPFAFGIYGFCFAGHSVFPNIYQSMADKREFTKAVIASFILCVFIYGSVAVMGYLMFGEGTLSQITLNLPPDAFASKVALWTIVRFFVFSLILNKYALMMNPLARSVEELLPESISRLVMALIGSLLSVLVAVIMPALCFLKIVGKNATSIQVTLSVVIAACGITSALIGTYSSLSKIVQTESH 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02525 525 MobiDBLite consensus disorder prediction 1 34 - -
Pumo5g02525 525 MobiDBLite consensus disorder prediction 35 67 - -
Pumo5g02525 525 PANTHER OS05G0424000 PROTEIN-RELATED 162 494 - -
Pumo5g02525 525 MobiDBLite consensus disorder prediction 1 67 - -
Pumo5g02525 525 Pfam Transmembrane amino acid transporter protein 158 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02525 Pumo-Chr5 69716950 69724020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02525 58 488 Amino Acid or Auxin Permease AAAP Family AT2G41190 60.417 5.86e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02525 K15015 - gmx:100790344 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02525 5 69716950 69724020 Pumo5g02525 5 69716950 69724020 ECH