Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02508 ATGGGACTGTGTCATGGAAAACCCATTGAAACCTCACAAAGTGAAGGTGGGCACCACGTTTTCCCCGGCGAGAAAGAGGTGGTGGTTGCGGCGGCGAGTCCCAAAACCACCACAAAAGGTTCAAAATTTCCGTTTTACAGCCCAAGCCCGCTGCCGAGCCTGTTCAAGAACTCGCCGGCGAACTCGAGCGTGAGCTCGACCCCTCTGCGGCTCTTCAAGCGGCCCTTTCCGCCGCCGTCGCCGGCGAAGCACATTCGGGCCCTGCTGGCCCGGCGCCACGGGTCCGTGAAGCCCAATGAGGCCTCCATCCCCGAAGGGAGTGAGTGTGAGGTTGGGCTCGACAAGAGCTTCGGCTTCTCCAACCACATCCATGCTCACTTTGAGCTTGGGCCCGAGGTGGGCCGTGGCCACTTTGGCTACACTTGCTCTGCCAAGGGAAGGAAAGGCACCTTCAAGGGCCATGATGTTGCTGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCAATTGCTATAGAGGATGTAAGAAGAGAAGTAAAGATATTGCGAGCACTGACTGGCCATAAGAATCTGGTGCAATTCTATGAAGCTTATGAAGACAATGACAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGTGAACTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAAGATGCCAAAGTTGTTATGATTCAGATATTAAGTGTGGTAGCTTTCTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTCTATATTTCTAAGGATGAAAATTCCACTCTGAAGGTCATTGATTTTGGACTGTCTGACTATGTAAAGCCAGATGAAAGGTTGAATGATATTGTTGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGGACAGAAGGAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCAAGGACGGAATCTGGCATATTTCGGGCTGTCCTGAAGGCAGATCCAAGTTTTGACGAAGCTCCTTGGCCATCTTTATCAGCTGATGCAATAGATTTTGTAAAGAGACTGTTGAATAAGGATTACCGTAAAAGGCTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTCGCAAATCATTGTGATGATGTGAGGATACCTTTTGATATGATAATCCACAAGCTTGTTAAAACTTATATATGCTCATCTTCTTTACGCAAATCAGCATTAGGGGTACGTAATATTGTCTGGTCATTTAGTATTGCTTATATCTAA 1311 0.4661 MGLCHGKPIETSQSEGGHHVFPGEKEVVVAAASPKTTTKGSKFPFYSPSPLPSLFKNSPANSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFSNHIHAHFELGPEVGRGHFGYTCSAKGRKGTFKGHDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDNDNVYIVMELCKGGELLDKILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLYISKDENSTLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEGDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALSHPWLANHCDDVRIPFDMIIHKLVKTYICSSSLRKSALGVRNIVWSFSIAYI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02508 436 FunFam CDPK-related kinase 3 119 291 - -
Pumo5g02508 436 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 407 - -
Pumo5g02508 436 SUPERFAMILY Protein kinase-like (PK-like) 119 417 IPR011009 -
Pumo5g02508 436 Pfam Protein kinase domain 128 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02508 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pumo5g02508 436 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Pumo5g02508 436 CDD STKc_CAMK 126 388 - -
Pumo5g02508 436 MobiDBLite consensus disorder prediction 1 22 - -
Pumo5g02508 436 Gene3D Phosphorylase Kinase; domain 1 120 216 - -
Pumo5g02508 436 ProSiteProfiles Protein kinase domain profile. 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02508 436 SMART serkin_6 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02508 436 FunFam Calcium-dependent protein kinase SK5 299 394 - -
Pumo5g02508 436 Gene3D Transferase(Phosphotransferase) domain 1 217 407 - -
Pumo5g02508 436 FunFam CDPK-related kinase 1 120 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02508 Pumo-Chr5 69376440 69383292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02508 1 422 EF-hand Containing Proteins AT3G50530 64.509 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo5g02508 Pkinase 1.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02508 - - gmx:100803625 796.964