Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02498 ATGGCATCCAGTTCAATCTCAGCCTCAGGCTCATGGAGTGTTAAGGACAACAAGGCCTTTGAAAAGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCTCATGCTGTTGGTGGCAAAACTCCAGAGGAAGTGAAGAGGCACTACGAGCTCCTTGTTCAGGATGTTAAGCATATTGAGTCAGGACGAGTGCCATTCCCAAATTACAAGAAAACTACTGCAGGGTCTGATCAGGATGAAAAAAGGCTGAGGAATTTGAATTTGAACCTCCAGTGA 291 0.4605 MASSSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTTAGSDQDEKRLRNLNLNLQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02498 96 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Pumo5g02498 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Pumo5g02498 96 CDD SANT 18 58 IPR001005 -
Pumo5g02498 96 MobiDBLite consensus disorder prediction 72 96 - -
Pumo5g02498 96 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pumo5g02498 96 Gene3D - 2 71 - -
Pumo5g02498 96 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pumo5g02498 96 SMART sant 8 60 IPR001005 -
Pumo5g02498 96 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Pumo5g02498 96 FunFam Transcription factor SRM1 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02498 Pumo-Chr5 69077964 69079263 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo5g02498 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02498 - - gmx:100818368 187.963