Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02477 ATGGAGCTCCTCTCCTTCCTCTTCCTCTCTCTTCTCTTCCTCCTCTATCTCTACATTCAATTCCTTGCTAGACAAACACCCCGCAACAACAAAGGCCTCAAAATCTACCCTTTAGTCGGAACCCTACCACACTTCTTGAAAAACCGCCACCGCTTCCTCCAATGGACCACCCAAGTCCTCCGCGACAGCCCCACCAACACCGCCGTCTTCTCCCGCCCCTACAAGCTCAACGGCGTTATAACGGCCAACCCCGACAACGTCGAACACGTGCTCAAAACCAAATTCGACAACTACCCTAAGGGCGAACGCTTCATCCACCTCCTCCAAGACTTCTTCGGCAACGGAACCTTCACATCCGACGGCGACCACTGGAGAGTGCAGCGAAAAATCACCAGCTACGAGTTCAGCACCAAATCGCTCCGAAACTTCATCGTCGACGCCGTCACCTTCGAACTTCAATCAAGGCTTCTTCCAATTCTCTCCAAAGCCTCCGAATCAAACACGGTTCTCGATTTGCAGGATCTATTGGAGCGCTTCGCATTCGACAACGTGTGCAAGCTAGCGTTCAACGTGGACCCCGCCTGTCTCGGCGGCGACGGCACCGCCGGCGCCGAGTTCATGCGCGCGTTCGAGGACGCCTCCGAGCTGAGTTTAGGGAGGTTCATGAGCGTGTTACCCGTTGTGTGGAAAACAAAGAAGCTGTTAAACGTTGGATCAGAACGGAGGCTCAGAAAATCAATCGCCACCGTCCACGAGTTCGCTGACTCGATCATACGGTCCAGATTGAACTCCAAGGACCACACCGGGGACGAAGACTTACTATCGCGTTTCATCAGAACAGAGGATAGCTCACCGAAGTTTCTCCGCGACGTAGTCATAAGCGTCATTCTCGCGGGGCGTGATACGACGTCGTCCGCGCTGAGCTGGTTCTTCTGGATTTTGTCCTCCAGACCTGACGTGAGGAGAAAAATTCGGGACGAAATCGAAAGGATTCGGTTTTCCACGCGCGGTGTTGGCGCGTTTGGGTACGAGGAGTTGAAGGAGATGCATTACTTGCACGCGGCGATTTCGGAGACAATGAGGTTGTACCCGCCTGTGCCTATTGACACGAGGGAGTGCCTGAACGACGACGTATTGCCAGATGGAACGAGGGTTGGGAAGGGGTGGTTTGTAACGTACCACACGTACGCAATGGGGAGGATGGAGAGCGTGTGGGGAAAAGAGTTTAACGAATTTAAGCCCGAAAGGTGGTTAGAGAATGGCGCGTACCGAGCGGGGAGTCCGTTTCGGTATCCGGTGTTTCACGCGGGTCCACGAATGTGTCTTGGGAAGGAAATGGCATACATTCAGATGAAGTCGATCGCAGCATCGGTAATGGAGAGGTTTGAGATGGAGGCAGTGGATAAGGACACGTGTCCGGAGCATGTTTTGTCTTTGACATTGAGGATCAAAGGAGGGCTGCCAGTGAGGGTAAGGGTAAGGGATGGATAG 1491 0.5359 MELLSFLFLSLLFLLYLYIQFLARQTPRNNKGLKIYPLVGTLPHFLKNRHRFLQWTTQVLRDSPTNTAVFSRPYKLNGVITANPDNVEHVLKTKFDNYPKGERFIHLLQDFFGNGTFTSDGDHWRVQRKITSYEFSTKSLRNFIVDAVTFELQSRLLPILSKASESNTVLDLQDLLERFAFDNVCKLAFNVDPACLGGDGTAGAEFMRAFEDASELSLGRFMSVLPVVWKTKKLLNVGSERRLRKSIATVHEFADSIIRSRLNSKDHTGDEDLLSRFIRTEDSSPKFLRDVVISVILAGRDTTSSALSWFFWILSSRPDVRRKIRDEIERIRFSTRGVGAFGYEELKEMHYLHAAISETMRLYPPVPIDTRECLNDDVLPDGTRVGKGWFVTYHTYAMGRMESVWGKEFNEFKPERWLENGAYRAGSPFRYPVFHAGPRMCLGKEMAYIQMKSIAASVMERFEMEAVDKDTCPEHVLSLTLRIKGGLPVRVRVRDG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02477 496 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 Pfam Cytochrome P450 36 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Pumo5g02477 496 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 CDD CYP86A 67 487 - -
Pumo5g02477 496 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 Gene3D Cytochrome P450 16 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02477 496 PANTHER CYTOCHROME P450 19 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02477 Pumo-Chr5 68761891 68763381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02477 6 494 Cytochrome P450 AT3G56630 57.344 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02477 - - gmx:100812147 842.802