Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02475 ATGGAAGGAGATGGGTATTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTCGGGTTTGCTGGTATGAACATAATCACCAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACATGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGGAAAGTGAGACCCAAGATGACATTTCTCATGTTCATGCAAATATTTGTGTTGGGTCTCCTTGGGCCTGTGATTGATCAGAACTTATATTATGCGGGGTTGAAATTTACTTCCCCTACTTATTCATGTGCTATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCTGCTATTTTCAGGATGGAGAAGGTGGACATCAGAAAAGTAAGATGCCAAGCAAAGGTGATTGGAACTATAGTAACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTCATCAGTTTCTTGGGGTCTAAGTACATGCATCACCCCAGAAACTATGTACCTGAAAACACCACTGATTCGGGTGAAAAGGATTGGTTCAAGGGTTCTATTCTGCTCATACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTGTGTGCCTTGGGTACACTGCAGTCAATTGCAGTTACCTTTGTCATGGAGCACAAACCATCTGTTTGGACCATTGGCTGGGACATGAACCTTCTTGCTGCAGCCTATGCTGGAATAATATCATCAGGTATCACCTACTATGTTCAAGGGATTGTCATGCAGAAAAAAGGGCCTGTTTTCGTAACTGCTTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTGCTTTCATCCTTGCAGAAAAAATATATCTTGGAGGGGTCGTTGGTGCTATTCTCATAGTAATTGGACTTTACTCGGTTCTGTGGGGCAAACACAAGGAGAACAAAGAGGAAGAGGCAGAGACAACCATTGAGGTGATGAAGTGTTGTTCAGAAAATGGGAGGTTGGAGACTGTGTTAGAAGATGCTGAAGCAAACAACGACATTGAGATGCAAAAGGGTGAAGCCTCCAGAGAGTTAAGGGTAGCCATTAGTGCTCCAAAAGCTTAA 1179 0.4402 MEGDGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKVRPKMTFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKVDIRKVRCQAKVIGTIVTVAGAMLMTLYKGQVISFLGSKYMHHPRNYVPENTTDSGEKDWFKGSILLILATLSWASFFILQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKPSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFILAEKIYLGGVVGAILIVIGLYSVLWGKHKENKEEEAETTIEVMKCCSENGRLETVLEDAEANNDIEMQKGEASRELRVAISAPKA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02475 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Pumo5g02475 392 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Pumo5g02475 392 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Pumo5g02475 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 337 - -
Pumo5g02475 392 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02475 Pumo-Chr5 68705673 68708336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02475 1 390 Nodulin-like Gene Family AT5G07050 62.785 8.32e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02475 - - gmx:100793545 725.702