Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g02447 | ATGGAACACCATTTTGGTCAAGACACTGCAACTGCATCTGGGTCCTTTGATAAGACTAGGGTTTTAAATGTGAAGCCATTAAGAACTCTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCATCTTCAACTCCACAAGGTGGTGCCCCTTTTGTGTGTGTTTCTCCTTCTGGTCCTTTTCCTTCAGGGGTTGCACCCTTCTACCCTTTCTTTATCTCCCCGGAATCCCAGAGGCTCTCTGAACAGAATGCACAAACCCCGACAGGTCGTGTGCCTGCAGCTCCGATATCTACTGCAGTTCCAATTAATTCATTTAGGACACCAACAGGGGCTGCAAATGGAGATGTGGGCTCGTCGCGAAAGAATGCCCGAAGTCGTGGACAGGTCACAGAGGAAGATGGCTACAGTAATGTTGAGATAGAGGAAATTGATGCAGATGAAGGAACTGGGACTGGGAGGTCAAAACGCAAGTCGCAGAAGAAGACAAAGGGACGGCAGAGTGGTGGTTCTGTTTCTGCTGATGTTGATCCGGATGCAGTCGCTGCTGACATTCTCAAATCACTTAACACAATGGTTTTTGATGTACTTAATCAACCAGAAGGTAGCAGGGACTCAGTTGCATATACACTCATGATATATGAAGTGATGCGAAGAAAGCTTGGACAAATTGAAGATTCAAATAGGGCAGCTAACTCTGGAGCAAAACGGCCTGATTTGAAGGCAGGTGCACTTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAACGTATTGGAGCTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGCTTACATGCTCCTTCTATGGCTGGAATTGATTACATTGGTACCAAAACCAGTCAAGAAGAAGAGCCCTTAGCTGTAAGTATCGTCTCATCTGGAGGGTATGAAGATAACGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTTAACCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAGAAGAGTGCGCATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAGGGATCCACAACATCCAACTGGGAAGGTTTACGTCTATGATGGCCTTTACAAGATTCAAGATTCCTGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTCAAGTATAAATTAGTCAGGTTGCCTGGACAGCCTCAAGCATATATGATTTGGAAATCCATTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAATGTACCTGTTTGTCTTGTGAATGATGTTGATAACGAGAAGGGCCCTGCATATTTCACTTACATCCCAACTCTCAAGAATTTGAGGCCAACTGCTCCTGTGGAATCTTCTACTGGATGTTCTTGTGTTGGTGGATGTCAACCTAACAATTTTAATTGTCCTTGCATTCAAAAGAATGGAGGCTATCTACCATATTCTTCAGCTTCATTACTTGCTGACCTAAAATCTGCAATATATGAGTGTGGTCCTTCTTGTCAATGTCCTTCTAATTGCCGAAATCGGGTTTCTCAAGGTGGCTTGAAATTTCGTTTGGAGGTTTTCAGAACCAAGAATAAAGGTTGGGGTCTTAGATCATGGGATGCTATTCGTGCAGGAACTTTCATATGTGAGTATGCAGGGGAAGTTGTAGATAGTTCTAGAGTGGAGGAGCTTGGTGGTGACAATGAAGATGATTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCTGGTGATACTGAAGCTCCGAAAATCCCATCCCCCCTTTATATATCAGCAAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCAGTCATACGTGAAAATAAGAATGAGTCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGATGGAGTTGACTTATGATTATGGGACAGTTCTTCCTCTCAAAGTAGGTCAGAGGAAAAAGAAATGCTTATGTGGATCTGTGAAATGCAGGGGTTACTTTTGTTAA | 2121 | 0.4323 | MEHHFGQDTATASGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTGRVPAAPISTAVPINSFRTPTGAANGDVGSSRKNARSRGQVTEEDGYSNVEIEEIDADEGTGTGRSKRKSQKKTKGRQSGGSVSADVDPDAVAADILKSLNTMVFDVLNQPEGSRDSVAYTLMIYEVMRRKLGQIEDSNRAANSGAKRPDLKAGALMMNKGIRTNSKKRIGAVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSAHRGNEVRVIRGLRDPQHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSIQQWTEKSASRAGVILPDLTSGAENVPVCLVNDVDNEKGPAYFTYIPTLKNLRPTAPVESSTGCSCVGGCQPNNFNCPCIQKNGGYLPYSSASLLADLKSAIYECGPSCQCPSNCRNRVSQGGLKFRLEVFRTKNKGWGLRSWDAIRAGTFICEYAGEVVDSSRVEELGGDNEDDYIFDSTRIYQQLEVFPGDTEAPKIPSPLYISAKNEGNVARFMNHSCSPNVLWRPVIRENKNESDLHIAFYAIRHIPPMMELTYDYGTVLPLKVGQRKKKCLCGSVKCRGYFC | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g02447 | 706 | MobiDBLite | consensus disorder prediction | 79 | 175 | - | - | |
Pumo5g02447 | 706 | ProSiteProfiles | Pre-SET domain profile. | 481 | 542 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pumo5g02447 | 706 | SMART | preset_2 | 435 | 529 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pumo5g02447 | 706 | SUPERFAMILY | PUA domain-like | 242 | 425 | IPR015947 | - | |
Pumo5g02447 | 706 | ProSiteProfiles | SET domain profile. | 545 | 680 | IPR001214 | GO:0005515 | |
Pumo5g02447 | 706 | Gene3D | - | 243 | 427 | IPR036987 | - | |
Pumo5g02447 | 706 | ProSiteProfiles | Post-SET domain profile. | 690 | 706 | IPR003616 | - | |
Pumo5g02447 | 706 | ProSiteProfiles | YDG domain profile. | 260 | 406 | IPR003105 | - | |
Pumo5g02447 | 706 | Pfam | SAD/SRA domain | 259 | 410 | IPR003105 | - | |
Pumo5g02447 | 706 | FunFam | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 | 243 | 425 | - | - | |
Pumo5g02447 | 706 | MobiDBLite | consensus disorder prediction | 101 | 133 | - | - | |
Pumo5g02447 | 706 | SMART | G9a_1 | 255 | 410 | IPR003105 | - | |
Pumo5g02447 | 706 | Gene3D | SET domain | 428 | 705 | IPR046341 | - | |
Pumo5g02447 | 706 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 119 | 705 | IPR025794 | GO:0016571 | |
Pumo5g02447 | 706 | MobiDBLite | consensus disorder prediction | 79 | 93 | - | - | |
Pumo5g02447 | 706 | Pfam | Pre-SET motif | 439 | 537 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pumo5g02447 | 706 | SUPERFAMILY | SET domain | 444 | 703 | IPR046341 | - | |
Pumo5g02447 | 706 | Pfam | SET domain | 556 | 680 | IPR001214 | GO:0005515 | |
Pumo5g02447 | 706 | SMART | set_7 | 545 | 686 | IPR001214 | GO:0005515 | |
Pumo5g02447 | 706 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 121 | 698 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g02447 | Pumo-Chr5 | 67565439 | 67570327 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g02447 | 6 | 705 | Su(var)3-9 homologs | AT1G73100 | 47.832 | 0.0 | 621 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Pumo5g02447 | SAD_SRA | 3.5e-50 | CL0178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g02447 | K24405 | - | gmx:100786650 | 1353.58 |