Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02443 ATGAAGATGGGACGAGCCAGGCTTCTGGTTTCAGACTTCGTTCTGTCTTTCATGTGGGTATGGTCCGGTGTTCTCGTTCGGATCCTCGTCTTCAAATATCTCGGCTTCGGTCATGCACCCCTCGGTGAGGTTATCAAGACTTTCTTCTCCGTCGTCAACATGTTCTTCTTCGCCTTCCTCGTCAAGGTCACACGTGGCGGCGCCTACAACCCCCTCACCGTTTTGGCCGATGCTATCTCCGGGGATTTTAACAACTTCCTCTACTGCGTTGCTGCCAGAATCCCCACTCAGGTGGCTGGATCGATTGTTGGAGTTAAACTTCTTATTGATACCATTCCTGAAGTAGGACGGGGACCACGTCTGAATGTTGACATTCATCAGGGTGCGCTGACAGAAGGATTACTAACATTTGCAATTGTAACCATTTCACTTGGACTTGCCACAAAAATTCGCGAAAATTTCTTCATGAAGACATGGATCTCCAGCCTCTCCAAGTTAACACTTCATATACTTGGCTCTGATCTGACTGGTGGTTGCATGAACCCTGCATCTGTAATGGGATGGGCTTATGCTCGAGGGGATCACATAACAAAGGAGCACTTCCTTGTATACTGGCTTGCTCCCATAGAAGCAACTATTTTAGCAGTGTGGACATTCAAATTGCTAGTGCAGCCTGTAAAAGAAGATAAAGCAGCCTCAAAAAGTAAATCGGATTGA 717 0.47 MKMGRARLLVSDFVLSFMWVWSGVLVRILVFKYLGFGHAPLGEVIKTFFSVVNMFFFAFLVKVTRGGAYNPLTVLADAISGDFNNFLYCVAARIPTQVAGSIVGVKLLIDTIPEVGRGPRLNVDIHQGALTEGLLTFAIVTISLGLATKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFLVYWLAPIEATILAVWTFKLLVQPVKEDKAASKSKSD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02443 238 SUPERFAMILY Aquaporin-like 5 230 IPR023271 -
Pumo5g02443 238 Gene3D Glycerol uptake facilitator protein. 3 238 IPR023271 -
Pumo5g02443 238 PANTHER AQUAPORIN SIP2-1-RELATED 2 238 IPR044226 GO:0015267
Pumo5g02443 238 Pfam Major intrinsic protein 6 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g02443 238 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g02443 238 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g02443 238 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g02443 238 PRINTS Major intrinsic protein family signature 162 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g02443 238 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02443 Pumo-Chr5 67494641 67497492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02443 3 238 Major Intrinsic Protein MIP AT3G56950 61.603 4.63e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02443 K09875 - gmx:100786138 419.853