Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02436 ATGGGATCTCAAGGTGGGGCAACCGAAGAGCCAAAAACTGGGTCTTTGACTAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGAGTGTGTGGACTGCTGAATCTGGAACTGATTCTTACATACAGCATGGTCAGGTGGCTTCTGCTGGCACATCTTTGAATCCACAAGGGAGCCTAACATTGAGTGGGGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAAAAGAAGAGTGTTAGTAAGGAAAGACAGCCTACACTGGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTGTGGCTACTGAACCTTTTTCTAATGAGGATAATGTTATGGCTATGTCAGGGGTTGATTCCCAACATAACACATCTCAACATGCCCATTGGATGCAATACCAGCTCACCCCAGTGCAGCAGCAGCCACAACAACAACAACATCAAAATCAGCAGAATAATGTGATGCCAGGTTTTTCCAGTTTTATGGCTGGCCATGTGGTTCAACAGCCTATCCCGGTTGTGGTAAATCCGGTTCTGGATGCAGGATACTCTGAAGCATTGCCATCTTCTTTGATGGGTGCCTTGTCAGATTCACAAACTGCAGGTAGGAAAAGGGTTGCCTCAGGTAATGTGGTTGAGAAAACTGTAGAGAGAAGGCAGAAGAGGATGATAAAAAATAGGGAATCCGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTCTCACATTTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAGGGTGTTGCCAAGTGCACCACCACCTGACCCCAAGCATCAGCTTCGCCGAACTAGTTCAGCTCCCCTTTGA 948 0.4631 MGSQGGATEEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAESGTDSYIQHGQVASAGTSLNPQGSLTLSGDLSKKTIDEVWRDMQQKKSVSKERQPTLGEMTLEDFLVKAGVATEPFSNEDNVMAMSGVDSQHNTSQHAHWMQYQLTPVQQQPQQQQHQNQQNNVMPGFSSFMAGHVVQQPIPVVVNPVLDAGYSEALPSSLMGALSDSQTAGRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLRRQNEIERVLPSAPPPDPKHQLRRTSSAPL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02436 315 Gene3D - 243 295 - -
Pumo5g02436 315 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 314 IPR043452 GO:0003700|GO:0045893
Pumo5g02436 315 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g02436 315 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 243 295 - -
Pumo5g02436 315 SUPERFAMILY Leucine zipper domain 245 291 IPR046347 GO:0003700|GO:0006355
Pumo5g02436 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Pumo5g02436 315 Pfam bZIP transcription factor 245 290 IPR004827 GO:0003700|GO:0006355
Pumo5g02436 315 CDD bZIP_plant_BZIP46 245 290 - -
Pumo5g02436 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 288 IPR004827 GO:0003700|GO:0006355
Pumo5g02436 315 MobiDBLite consensus disorder prediction 289 315 - -
Pumo5g02436 315 SMART brlzneu 241 313 IPR004827 GO:0003700|GO:0006355
Pumo5g02436 315 Coils Coil 268 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02436 Pumo-Chr5 67397692 67402866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02436 1 315 bZIP Transcription Factor Family AT3G56850 57.362 8.20e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g02436 bZIP_1 5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02436 K14432 - gmx:100783666 526.168