Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02384 ATGGAAGATCAGGGTCAGCAACAGGAGGCAAAGAGTCCAAGGCAGCAGCAAGGCCCCGAGAGGAGTGAAGCGGTTCGGTCAAGGTGGACTCCGAAGCCGGAACAAATCCTCATACTCGAGTCCATCTTCAACAGTGGCATGGTGAACCCTCCAAAGGACGAAACCGTCAGAATTAGAAAGCTCCTCGAGAAATTCGGCGCTGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCTGCCGCCGCCACCGCCACCCCCGTTGATCAGACTCAGACTCAGCCTCTTGTTGGTGGTGGTGGTGGTGGTGGTGCAATTCCACATGGTGCTACTTCAACCATGGGTTTTGGTTCTTCTCCATGTTATGATCTCCTTGGTTCCTCTTCTTCATCTGGTGGTGGTGGTGGTGTAATTGGTGGCCAACAAGGCATGGATGGTTTCTTTTCGGTTTCTTCTCAAATGGGTTTCGCTGAAATCACTGACCACACTTCACCTGCATCATCAGTTTTGTACCCTCCTCTTGATCCAAATTTCAGCTACCAGGCTGGATATGGGGGCACTAATATTTCAGGATTCATCACCGTGTTTATCAATGGGATTGCAACAGAACTTCCAAAGGGACCAATAGACATCAAAACCGTGTTTGGAGAAGGTGTAATGTTAGTTCATTCCTCTGGAGTGCCAATTCCCACCAATGAATTTGGGTTCTTGATGCAGAACCTTCAGCATGGCGAAAGCTACTTTCTGGTATCAAAGCCAACATAA 810 0.5074 MEDQGQQQEAKSPRQQQGPERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQAAAATATPVDQTQTQPLVGGGGGGGAIPHGATSTMGFGSSPCYDLLGSSSSSGGGGGVIGGQQGMDGFFSVSSQMGFAEITDHTSPASSVLYPPLDPNFSYQAGYGGTNISGFITVFINGIATELPKGPIDIKTVFGEGVMLVHSSGVPIPTNEFGFLMQNLQHGESYFLVSKPT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02384 269 SMART HOX_1 24 91 IPR001356 GO:0003677
Pumo5g02384 269 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 268 IPR044558 GO:0003700|GO:0048830
Pumo5g02384 269 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Pumo5g02384 269 SUPERFAMILY Homeodomain-like 20 93 IPR009057 -
Pumo5g02384 269 FunFam WUSCHEL-related homeobox 11 26 93 - -
Pumo5g02384 269 MobiDBLite consensus disorder prediction 89 107 - -
Pumo5g02384 269 Gene3D - 26 93 - -
Pumo5g02384 269 MobiDBLite consensus disorder prediction 1 30 - -
Pumo5g02384 269 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Pumo5g02384 269 MobiDBLite consensus disorder prediction 85 107 - -
Pumo5g02384 269 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02384 Pumo-Chr5 66418006 66420270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02384 13 265 Wox Gene Family AT3G03660 56.322 6.39e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo5g02384 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02384 - - gmx:100791266 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02384 5 66418006 66420270 Pumo5g02384 5 66418006 66420270 ECH