Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02383 ATGAAGTTCACCATTCTTATCTTGTTCTTTGTCTTTTTTTCCATTGCATTCGGTGATCTGAGGGTTGGGTTCTATAGCTCTAGTTGCCCAAGAGCAGAGGAGATTGTACATCAAGTTGTTCAGAGGAAATTCAACCAAGATAGATCCATTGCCGCTGCCTTGCTTCGTATGCACTTCCATGACTGCTTTGTCAGAGGTTGTGATGCGTCCATATTAATAGACTCAACCAAGGGCAATTCATCAGAGAAAGCTGCAGGGGCAAAGGGCACCGTTCGGGGATTCGAGCTCATAGACGAAATCAAAAAAGCCTTAGAAAGCGAATGTCCATCAACGGTTTCATGTGCCGACATAATAACCCTCGCCACACGGGATTCCGTGGCCATGTTAGGTGGGCCCCAATACGACGTCGCAACAGGAAGACGTGACGGGCTCGTGTCCCAATCCTCCGAAGTGAAACTTCCCGGGCCAGGATCCACTGTGTCGCAGGCTTTCTGTCAAGGGAGGCTCGGTGACCCCTTAATGGACCCTACTTTGCGGGCCCAGTTGATCCAGATATGCTCTAGGCCCAATGTGAGGGATCCCGCGGTGTCTTTGGACCAAGGCACGTCGATGGTTTTTGACAACGAGTTCTACAACCAGATTCTTTTGGAGAGAGGGGTGCTTTTCATCGACCAGCAATTGGCCTTGGACCCTTTGTCCAAAGGGTTGGTCTCGATTCTTGCGGGGGATGATGAGGGCTTTCAAAACAGTTTTGCTGATGCTATTGTGAAGATGGGGAGCATTAAGGTTTTGGTTGGGAATGAGGGAGAGATTAGGAGAAACTGTAGGGTTTTTAATAATGCTTCCTATAATTAA 855 0.4842 MKFTILILFFVFFSIAFGDLRVGFYSSSCPRAEEIVHQVVQRKFNQDRSIAAALLRMHFHDCFVRGCDASILIDSTKGNSSEKAAGAKGTVRGFELIDEIKKALESECPSTVSCADIITLATRDSVAMLGGPQYDVATGRRDGLVSQSSEVKLPGPGSTVSQAFCQGRLGDPLMDPTLRAQLIQICSRPNVRDPAVSLDQGTSMVFDNEFYNQILLERGVLFIDQQLALDPLSKGLVSILAGDDEGFQNSFADAIVKMGSIKVLVGNEGEIRRNCRVFNNASYN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02383 284 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Pumo5g02383 284 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 Gene3D - 259 279 - -
Pumo5g02383 284 PANTHER - 170 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 Gene3D - 23 153 - -
Pumo5g02383 284 Gene3D Peroxidase, domain 2 166 258 - -
Pumo5g02383 284 CDD secretory_peroxidase 20 278 IPR033905 GO:0004601|GO:0042744
Pumo5g02383 284 Gene3D Peroxidase, domain 2 154 163 - -
Pumo5g02383 284 FunFam Peroxidase 23 160 - -
Pumo5g02383 284 Pfam Peroxidase 36 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 SUPERFAMILY Heme-dependent peroxidases 19 279 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02383 284 ProSiteProfiles Plant heme peroxidase family profile. 19 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02383 Pumo-Chr5 66395463 66397421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02383 4 280 Peroxidase AT4G26010 51.935 3.73e-104 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02383 K00430 - gmx:100820340 409.453