Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02382 ATGAAGTTCACCATTCTTATCTTGGTTTTTATTTTTCCCATTGCATTTGCTGATCTTAGGGTTGGGTTCTATAGCTCTAGCTGCCCAAGAGCAGAGGAAATTGTACGTCAAGTTGTTCAGAGGAGATTCAACCGCGATAGATCCATTACTGCTGCCTTGCTTCGCATGCACTTCCATGACTGCTTTGTCAGAGGTTGTGACGCGTCGATATTAATAGACTCGACCAGGGGCAATCAATCGGAGAAAGCTTCAGGAGCAAACGGCACCGTTCGGGGATACGAGCTCATAGACGAAATAAAAAAAGCCTTAGAAGGAGCATGTCCATCAACGGTTTCATGCGCCGATATAATAACACTTGCCACACGAGATTCCGTGGCCATGTCAGGTGGGCCCCGATACGACGTCGCAACGGGAAGGCGTGACGGGCTCGTGTCCCAATCCTCCGAAGTGAACCTTCCCGGGCCACGATCCACTGTGTCGCAGGCCTTGCAAGCCTTCACCGCAAACGGCATGTCGTTGGACGAAATGGTTACGCTTCTGGGGGCCCACACCGTTGGTTTTGCGCACTGCAGTTTCTTTCGAGACAGGCTCAACGACCCCAACATGGACCCTTCTTTGCGGGCCCAGTTGGGCCGGATATGCAGCAGGCCCAGAGATCCAACGACGTTTTTGGACCAAAACGCATCGTCGTCGATGGTTTTTGACAACGCGTTCTATAACCAGATTCTTTTGAAGAGAGGGGTGCTTTTCATCGACCAGCAATTGGCCTTGGACCCTTCGTCCAAAGGGTTGGTCTCAACTTTTGCGGGGAATGATGCGGCTTTTCAAAGGAGTTTTGCTGATGCTATGGTCAAGATGGGGAGCATTAAGGTTTTGGTAGGGAATGATGGAGAGATTAGGAGAAATTGTAGGGTTTTTAATAGGGCTTCGTAG 933 0.5016 MKFTILILVFIFPIAFADLRVGFYSSSCPRAEEIVRQVVQRRFNRDRSITAALLRMHFHDCFVRGCDASILIDSTRGNQSEKASGANGTVRGYELIDEIKKALEGACPSTVSCADIITLATRDSVAMSGGPRYDVATGRRDGLVSQSSEVNLPGPRSTVSQALQAFTANGMSLDEMVTLLGAHTVGFAHCSFFRDRLNDPNMDPSLRAQLGRICSRPRDPTTFLDQNASSSMVFDNAFYNQILLKRGVLFIDQQLALDPSSKGLVSTFAGNDAAFQRSFADAMVKMGSIKVLVGNDGEIRRNCRVFNRAS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02382 310 FunFam Peroxidase 22 162 - -
Pumo5g02382 310 FunFam Peroxidase 153 286 - -
Pumo5g02382 310 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 Pfam Peroxidase 35 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 Gene3D - 23 307 - -
Pumo5g02382 310 PANTHER - 5 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 Gene3D Peroxidase, domain 2 153 286 - -
Pumo5g02382 310 SUPERFAMILY Heme-dependent peroxidases 18 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Pumo5g02382 310 ProSiteProfiles Plant heme peroxidase family profile. 18 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 CDD secretory_peroxidase 19 306 IPR033905 GO:0004601|GO:0042744
Pumo5g02382 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Pumo5g02382 310 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g02382 310 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02382 Pumo-Chr5 66387212 66388850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02382 6 307 Peroxidase AT4G26010 61.386 3.26e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02382 K00430 - gmx:100820340 532.717