Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02364 ATGGCAGAAGAGGATCCAAAGCCTCTCAACTACATCCCCGAGGTCATACTCAAGAAGAGGAAAAGCACCGAAGCATGGGCTTTGCGCAAAAAAGAACAGTTCCAGCAAAAAAAATTCCAATCCATCAAGAAGCCCGAGGATTTCATCCACGAGTATCGCAACAAGGAGGTGGACCTTGTAAGAATGAAGCGGAGGGTGAAGAGGAAAGTGCCTCAAGCTAACTCCAACATGTTGATAATCATTCGGATACAGGGGAAAAAGGACATGCATCCGAAGACGAGGAAGGTGTTGTACAGCTTGGGGTTGAGGAGAATGTTCAGTGCTGTGTTTGTGAAGCCAAGTGAGGGAATAATGGCCAAGCTGCAGAGAGTGGAACCATATGTAACCTATGGATATCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAAGGACATGCGAGGATGGATAAGCGAAAAGTTCCCTTGACGGATAATAACATTATTGAGCAGGAATTAGGAAATTTTGGTATTGTATGCATAGAAGATATGGTGCATCAGATTTATAATGCTGGTCCACACTTTAAGGAAGTTGTGAGATTTATGTGGCCCTTTGAGCTCAACAAGCCAGCTGAAGGATTGAAAGGATCAAAAACCCTATTCAAGGACGGTGGAGACACAGGGAACCGTGAGGATCTCATCAACGAACTAATCAATAAAATGAATTAG 711 0.4304 MAEEDPKPLNYIPEVILKKRKSTEAWALRKKEQFQQKKFQSIKKPEDFIHEYRNKEVDLVRMKRRVKRKVPQANSNMLIIIRIQGKKDMHPKTRKVLYSLGLRRMFSAVFVKPSEGIMAKLQRVEPYVTYGYPNLKSIKELIYKKGHARMDKRKVPLTDNNIIEQELGNFGIVCIEDMVHQIYNAGPHFKEVVRFMWPFELNKPAEGLKGSKTLFKDGGDTGNREDLINELINKMN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02364 236 PANTHER 60S RIBOSOMAL PROTEIN L7 9 236 IPR039699 -
Pumo5g02364 236 SUPERFAMILY Ribosomal protein L30p/L7e 77 236 IPR036919 -
Pumo5g02364 236 NCBIfam 60S ribosomal protein uL30 18 236 IPR005998 GO:0000463|GO:0003735|GO:0022625
Pumo5g02364 236 CDD Ribosomal_L7_archeal_euk 77 236 IPR035808 -
Pumo5g02364 236 Gene3D - 77 183 IPR036919 -
Pumo5g02364 236 Gene3D - 184 236 IPR036919 -
Pumo5g02364 236 FunFam 60S ribosomal protein L7-1 isoform A 182 236 - -
Pumo5g02364 236 Pfam Ribosomal protein L30p/L7e 78 128 IPR016082 -
Pumo5g02364 236 FunFam 60S ribosomal protein L7 77 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02364 Pumo-Chr5 65927185 65929540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02364 1 236 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.251 1.03e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02364 K02937 - gmx:100500005 433.335