Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02352 ATGGTCGTGCCTGGTTCCTTTCCACCAACTTCGAAGAGGAGAAGGGTCACCAACGTTTGTTCCACCGACATGGATACTGAAACTGCCCAGGCCAAGCTTGCTGCTGTCAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGTTCGTTCTTCATCTTCAAATGCTGCGTTATCCAATGGAGAGGAGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATTACAGACTTTTGGCTGCTAAAAAGGAAGATAAATTATTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGCTGTAATTAGAGTTCGCTTCCCCGATAATCAAACGTTGGAGGCTACCTTCCACCCATCAGAAACAATCCAGAGTTTAATTGATCTCCTCACTAAAGTTATTGCACAGCCAGAGCAGCCATTCTATATATACACTACTCCACCTAAGAAGGTGATCAATGACATGTCTCAGGATTTTTACACTGCTGGCTTTTGTCCTGGTGCCATCGTGTATTTCTCATACAATGTCCCAAAAGGTGATAGCTCTGTGGGTGACCATACTAGTCCTTACCTCCAAGAAGAGATCTTGTCTTTGAAGGATTTGCATGTTGCCATTGATCAAGGCCAGCAATCCGAGCCTGTTGTACAGTCAGAACCAGAACCTGCTGTGGCAGCACATCCCCCTCCTGTTGAAGAACGCAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGCTAAAAATGTGA 774 0.4393 MVVPGSFPPTSKRRRVTNVCSTDMDTETAQAKLAAVKERFGREIHVFETSVRSSSSNAALSNGEETDDFYEFTAEDYYRLLAAKKEDKLLKTRKIREAEEAARRSRITKAVIRVRFPDNQTLEATFHPSETIQSLIDLLTKVIAQPEQPFYIYTTPPKKVINDMSQDFYTAGFCPGAIVYFSYNVPKGDSSVGDHTSPYLQEEILSLKDLHVAIDQGQQSEPVVQSEPEPAVAAHPPPVEERKPAEKKLVKPKWLKM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02352 257 MobiDBLite consensus disorder prediction 239 257 - -
Pumo5g02352 257 Pfam UBX domain 108 175 IPR001012 GO:0005515
Pumo5g02352 257 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 257 IPR044232 GO:0032984|GO:0051117
Pumo5g02352 257 MobiDBLite consensus disorder prediction 216 257 - -
Pumo5g02352 257 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Pumo5g02352 257 CDD UBX2_UBXN9 110 183 - -
Pumo5g02352 257 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Pumo5g02352 257 Gene3D - 99 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02352 22 138 C2H2 Transcription Factor Family AT2G01650 33.884 3.26e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02352 K15627 - gmx:100818386 441.039