Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02313 ATGTTACCATTGGTTCTTTTAGCTTTTCCCATCTTGCTATTATTCTTCTTCCAAAAACACAAAATTTCTAAGAAGCCAACCTTTCCACCATGCCCTAAAGGCATTCCCTTCTTTGGCAATCTTTACCAATTCGATTGCTCTGCTCTTTGTTTGCAACTCTATGAACTCTCAAAAAAACATGGCCCCATCTTTTCCCTTCAACTGGGTTCAAGGAAAATCATTATCATCTCCTCTCCAAAACTGGCCAAGGAGGTAATGAAAACCCATGACCTTGAGTTTTGTGGCCGACCCTCCCTCATAAGCTCAATGAAATTTTCATATAACGGACTAGACATGGCGTTTTCACCCTACAGAGACTATTGGAGACACACGAGAAAATTTTCCATCATCCATTTCTTTAGCCTCAAGCGTGCCCTAATGTTTTCATCAATAAGAAAACATGAGGTTACCCTATTGATGAAAAAGATAGCGAACCACGCTTCTTGTTCCAAGGTTACCAACTTGCACGAGTTGCTGACGTGTCTAACGAGCGCCATAGTGTGTAGGACTGCTTTTGGTAGAAGGTACGAGGAGGAAGGGATCGAGAGAAGCATGTTCCATGGCATGCTTAAAGAGGCGCAGGAGTTGATGATTTCGATCTTCCACACAGATTATGTTCCTTTTGTTGGGGGAGTGCTTGATAAACTTAGTGGATTGATGGGTCGTCTTGAGAAAATGTTCAAGGTGTTGGATGAGTTTTATCAGAATGTTATTGATGAACACCTTGATCCTCAAAGGAAGAAACTTGGGGATGAGGAGGATATAATCGATGCCTTGCTTCAATTGAAGAATGATCGTTCCTTCTCAATGGATCTCACTCCCGCTCACATCAAACCCTTGATGATGAATATAATTTTGGCAGGGACAGACACAAGTGCAGCCTCAGTAGTTTGGGCTATGACTGCCCTAATGAAGAACCCAAGAGTAATGAAGAAAGCTCAAGAAGAGATTAGAACCATGTTTGGTAGTGAGAAAGGTTTCATAGAGGAAGATGACATCCAAAAGCTCCCTTATCTCAAGGCCGTTATAAAAGAAACAATGAGATTGTACCCACCACTGCCTCTGCTTCTGCCAAGAGAAACGATTAGAAGTTCTAGCCTTGCAGGGTACGAAATTCCGGAGAAGACATTGGTGTATGTGAATGCTTGGGCAGTGCATAGAGACCCAGAAACATGGAAGGAGCCAGAAGAGTTTCGCCCTGAGAGGTTCCTAGACAGCACAATAGATTTTAGAGGATGTGATTTTGAGCTGATTCCATTTGGTGCTGGCCGAAGGATTTGCCCCGGCATACATATGGGGATTATCACTGTGGAACTTGTGCTTGCTAATCTTTTGTGTTCATTTGATTGGGAAATGCCTCAAGGGATGAAAAGGGAAGACATAGACACTCATGTGCTTCCAGGGTATATCCAACACAAGAAAAATCCTCTCTGCCTAGTTGCTAAGAAGCCAGTGTGA 1497 0.4289 MLPLVLLAFPILLLFFFQKHKISKKPTFPPCPKGIPFFGNLYQFDCSALCLQLYELSKKHGPIFSLQLGSRKIIIISSPKLAKEVMKTHDLEFCGRPSLISSMKFSYNGLDMAFSPYRDYWRHTRKFSIIHFFSLKRALMFSSIRKHEVTLLMKKIANHASCSKVTNLHELLTCLTSAIVCRTAFGRRYEEEGIERSMFHGMLKEAQELMISIFHTDYVPFVGGVLDKLSGLMGRLEKMFKVLDEFYQNVIDEHLDPQRKKLGDEEDIIDALLQLKNDRSFSMDLTPAHIKPLMMNIILAGTDTSAASVVWAMTALMKNPRVMKKAQEEIRTMFGSEKGFIEEDDIQKLPYLKAVIKETMRLYPPLPLLLPRETIRSSSLAGYEIPEKTLVYVNAWAVHRDPETWKEPEEFRPERFLDSTIDFRGCDFELIPFGAGRRICPGIHMGIITVELVLANLLCSFDWEMPQGMKREDIDTHVLPGYIQHKKNPLCLVAKKPV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02313 498 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pumo5g02313 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 Pfam Cytochrome P450 29 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 CDD CYP71-like 59 490 - -
Pumo5g02313 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 PANTHER CYTOCHROME P450 71B11-RELATED 13 495 - -
Pumo5g02313 498 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02313 498 FunFam Cytochrome P450 83B1 15 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02313 Pumo-Chr5 63914288 63916599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02313 2 498 Cytochrome P450 AT4G31500 45.600 1.46e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02313 - - gmx:100803017 845.884