Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02311 ATGTGCAACAAGAACAGTCCTTCTTCTTCGGACATTCAAACAACAACCTCTATTATGAAGAGGACGCGAAAGCCGAATAGAAGGTATCAGTATTACCACTCTTGTTCCTCTTCTTCTTCTTCCTCGACGACGTCGCTTAAGCCGCACCGTCGTGGGAACAGGACCAAGACGCGGAAGCCCAAGTTCGTTAGTCTGAGGCTTCAGTTATCCGAGCCCAATTTGAACATGGCCGAAGCCCAGCCCAAGGCCCAACAAGAGCAAGAACAAGAACAAGAACAACAGCCGCAGCTGAATCTCTTCCCTCTCCATCCGGAGCACCATGACATGCACGAGGAGCAGAACGTGGCGCTTCTCTTCAGCTCCGACGGCGGCGCCACCCTCAACGGGTTACTGGAGGATGATTCGACGACGGCGACGACGTCGCCGTCGTCGGAGGAGGGGTCGATGTCGGTGCTGACGTGTCCGGCGGAGGATACCGGGAACTGGCTGGTGAGGAAGGCGATGCGGCGGAGGGAGAGCGAGGAGGGGAGCGCGGAACGGTGGGTGTGCTACTCGGAGGTGGTGGAGGAGAAGAAGGAGGCGATGGAGGAGGTAACGAGTTATTGCGTCAAAACGAAAACGACGTCGTCGTTTGGGTTGTTGTCGTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTCTACGTCGCGGGGGAGGAGGAGGGGGCCCCACACACTGTCCCTGACTTCCTCAATGGTTTCCTCCTTCATAATGCCATCGTCCCCCATGTTGCATGGGACGGTTGGGGGAGTGGTGTTGTTGGGAACGCATGGAATGTTCCTGAGGAGTGTGGGGCTAACAAGACGAATGTGAAGGAAGAAACGAGTTGGAAGTTGGGGCAGAGAGAGGCATGTGTGCAGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTCTCTAAGAGGATCCGTTATGAAGTTCGCAAGCTCAATGCTGAGAAACGGCCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1035 0.5488 MCNKNSPSSSDIQTTTSIMKRTRKPNRRYQYYHSCSSSSSSSTTSLKPHRRGNRTKTRKPKFVSLRLQLSEPNLNMAEAQPKAQQEQEQEQEQQPQLNLFPLHPEHHDMHEEQNVALLFSSDGGATLNGLLEDDSTTATTSPSSEEGSMSVLTCPAEDTGNWLVRKAMRRRESEEGSAERWVCYSEVVEEKKEAMEEVTSYCVKTKTTSSFGLLSLKLDHQGILNAWSDKGSLYVAGEEEGAPHTVPDFLNGFLLHNAIVPHVAWDGWGSGVVGNAWNVPEECGANKTNVKEETSWKLGQREACVQRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02311 344 MobiDBLite consensus disorder prediction 128 153 - -
Pumo5g02311 344 Pfam CCT motif 301 343 IPR010402 GO:0005515
Pumo5g02311 344 MobiDBLite consensus disorder prediction 130 150 - -
Pumo5g02311 344 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g02311 344 MobiDBLite consensus disorder prediction 1 65 - -
Pumo5g02311 344 MobiDBLite consensus disorder prediction 29 48 - -
Pumo5g02311 344 ProSiteProfiles CCT domain profile. 301 343 IPR010402 GO:0005515
Pumo5g02311 344 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 16 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02311 Pumo-Chr5 63745177 63752421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02311 214 343 C2C2-CO-like Transcription Factor Family AT1G73870 42.308 1.56e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo5g02311 CCT 1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02311 - - gmx:100811815 518.464