Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02300 ATGGCATATAGATATCATTTAGTTGACTTCTCACAACCGTATGTTGAATCTGGCATTGACATGGTGGTTACAGAGCAGTCAGCTAAATCAAAAGAAACATGGATCTTTTTAAAGGCCTTCACAAAAGAGATGTGGTTGATGATGGCAGCATTGCACATTTTCGTGGGATTTGTCATTTGGTTGATTGAAAGGAAAGTTAATGAAGAGCTAAAAGGATTGGGGTCCATGCTTTGGTTCTTAGTCACTATAATATTCTATGCACACAGAGAACCAATTAGAAGCCCCTTGGCTCGAACTATGCTGGCACCATGGTTATGTGTGATCCTAATTGCAACTAGTACTTTCACAGCAAGTTTGACTTCCATGATGACTGTTTCACAAGTCTTAGATATCCATACCCTTCTGGAAAGAAATTCTCCAGTTGGCTTTAATGGAAATTCGTTCATTGTGAAGTATTTGACCGAGGTACAAAAATTCAGGCCTGAGAACATTAGGAAAATTAACTCCATAAATGATTACCCATCTGCCTTTCATAACAAGGATATTGAAGCCGCTTTCTTTATTGTGCCTCACGCTAAGGTCTTTTTGGCAAAGTACTCATGCAAGGGTTTCATCAAGGCAGGGAACACTTTCAAGCTTGGAGGCTTAGGTTTTGTGGGTCTTTCTCCTCTCATTGTCACCATTTTATGA 690 0.3957 MAYRYHLVDFSQPYVESGIDMVVTEQSAKSKETWIFLKAFTKEMWLMMAALHIFVGFVIWLIERKVNEELKGLGSMLWFLVTIIFYAHREPIRSPLARTMLAPWLCVILIATSTFTASLTSMMTVSQVLDIHTLLERNSPVGFNGNSFIVKYLTEVQKFRPENIRKINSINDYPSAFHNKDIEAAFFIVPHAKVFLAKYSCKGFIKAGNTFKLGGLGFVGLSPLIVTIL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02300 229 Pfam Ligand-gated ion channel 42 128 IPR001320 GO:0015276|GO:0016020
Pumo5g02300 229 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 224 IPR015683 -
Pumo5g02300 229 Gene3D - 29 171 - -
Pumo5g02300 229 FunFam Glutamate receptor 33 162 - -
Pumo5g02300 229 SUPERFAMILY Periplasmic binding protein-like II 4 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02300 Pumo-Chr5 62493704 62494750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02300 4 219 Ion Channels AT4G35290 36.000 2.54e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02300 - - gmx:100778941 404.06