Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02256 ATGGTGATAAGTTTCATCATGGCAGGGAGGGACACTACTTCAGCAGCTATGACATGGTTCTTTTGGGTGCTATCACATTATTCCCATGTGGAGAGCCAGATAGTGGAAGAGGCAAAAGGGATGTTGGATTATGAATCATTGAAGAATTTGAGTTTCTTGAAGGCATGTTTGTGTGAGTCCATGAGGCTGTACCCCCCAGTGGCATGGGACTCTAAGCATGCCACTGATGATGATCTGTTGCCAGATGGCACTGTGGTCAAGGCAGGAGATAGGGTCACATATTTTCCCTATGGAATGGGGAGAATGGAAGACTTGTGGGGGAAGGACTGGTTTGAATTCAGACCAGATCGGTGGTTTGTGGAACCAGGAAACAGTGAGGGAACAATGTTGAGTGAGGTTTCTCCTTTCATTTTTCCAATTTTTCAGGCTGGTCCAAGGGTGTGTCTAGGCAAGGAAATGGCCTTTCTTCAAATGAAGTATGTGGTGGCTTCAATTCTCAGCAGATTCAAATTTAGAATTGTTGGTCCAGAGAGGCCTATATTCGTGCCACTGCTCACGGCACACATGGCTGGCGGCTTAAGAGTACTGGTTTCTAAAAGGGAAAAACAACTGAGTTAG 618 0.4579 MVISFIMAGRDTTSAAMTWFFWVLSHYSHVESQIVEEAKGMLDYESLKNLSFLKACLCESMRLYPPVAWDSKHATDDDLLPDGTVVKAGDRVTYFPYGMGRMEDLWGKDWFEFRPDRWFVEPGNSEGTMLSEVSPFIFPIFQAGPRVCLGKEMAFLQMKYVVASILSRFKFRIVGPERPIFVPLLTAHMAGGLRVLVSKREKQLS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02256 205 Gene3D Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 Pfam Cytochrome P450 2 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS P450 superfamily signature 55 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS P450 superfamily signature 8 25 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS E-class P450 group IV signature 84 98 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS E-class P450 group IV signature 148 166 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS E-class P450 group IV signature 50 66 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PRINTS E-class P450 group IV signature 101 119 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g02256 205 PANTHER CYTOCHROME P450 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02256 Pumo-Chr5 60631828 60632445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02256 2 202 Cytochrome P450 AT5G63450 66.019 5.72e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02256 K20665 - gmx:100815295 392.889