Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02219 ATGGAAATGGCTAATGAGAACGGTTTCCAACTTAGTGTGAAGCTAAGTGAACCAACTCTAGTTCCTCCTGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCTGTGGTTGTGAGAACTGTTTATTGCTTCAAAGCTGCTGAGAGGGGGAATGAGAAGGCTGGGGAAGTGATCAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGGCTTACTATAAGCTCAGAGGGTAAACTCATAGTGGATTGCACAGGAGAAGGTGCCTTGCTTGTGGAGGCTGAAGCAAACTGTTCAATGGAGGAGATTGGTGACATCACAAAGCCAGACCCTGGGACTCTTGGTAAGCTTGTTTATGACATTCCTGGAGCAAAGCACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCACTTGGGCTGTGCATGAACCACTGCATGTTTGATGGCATTGGTGCCATGGAGTTTGTGAACTCCTGGGGAGAAGCAGCCAGAGACTTGCCACTCTCAATCCCTCCAGTGCTAGACAGAAGCATACTCAAGGCAAGAAAAACACCAAAGATAGAGCACCTGCATCAAGAATTTGCTGACATTGAAGACAAGTCCAACACCAACAGTTTATATGAAGATGAAATGGTCTACAGGTCCTTTTGTTTTGATCCTGAGAGACTGAAGCAACTGAAGATGAAAGCCATGGAAGATGGAGCTCTTGACACATGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCCAGAACCAAGGCACTGAAAATGTTGCCAGACCAACAAACAAAGCTTCTCTTTGCTGTTGATGGGAGGGCCAAATTCAACCCACCTCTTCCAAAAGGGTACTGTGGGAATGGAATTGTGCTAACAAACTCTGTGTGCCAGGCTGGTGAGCTAACAGAAAAGCCCTTCTCATTTGGTGTGAGGCTCATTCAAGATGCAATCAAGATGGTCACAGACAGTTACATGAGGTCAGCTATTGATTACTTTGAGGATGACAAGAGCAAGGCCTTCTCTTGCTTGCACCCTTCTGATCACAACTTGGTCCAGGCTCTCCTTTCACACCACTGA 1140 0.4579 MEMANENGFQLSVKLSEPTLVPPAEETKKGLYFLSNLDQNIAVVVRTVYCFKAAERGNEKAGEVIKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALLVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEAARDLPLSIPPVLDRSILKARKTPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCFDPERLKQLKMKAMEDGALDTCTTFEVLSAFVWIARTKALKMLPDQQTKLLFAVDGRAKFNPPLPKGYCGNGIVLTNSVCQAGELTEKPFSFGVRLIQDAIKMVTDSYMRSAIDYFEDDKSKAFSCLHPSDHNLVQALLSHH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02219 379 Gene3D - 214 372 IPR023213 -
Pumo5g02219 379 Gene3D - 8 213 IPR023213 -
Pumo5g02219 379 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 359 - -
Pumo5g02219 379 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Pumo5g02219 379 Pfam Transferase family 12 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02219 Pumo-Chr5 59550776 59552691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02219 11 354 Monolignol Biosynthesis Gene Families AT5G48930 34.483 5.49e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02219 K15400 - gmx:100804504 691.419