Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02207 ATGATGAACAACGGAAGGTACATTCTGCAGAAGATCAAGGGTTCGAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATCAGGAAGAAGTCCTCGGAGCTGAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAACAGGGTTCTGGCGTGCCTGAACCACGAAGGGTTGAACGTGAATGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCTTTGTTCGACGAGATTCACAGGACGCAGAGCACGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATCTCCGGAGTGGTGATTCCGGCGTACAGGGCCTTCATTGGGAGATTTGCGCAGATTTTTGACCCCGGAAGACAGACTGAGAAGTACATAAAGTACCAACCTGAAGACATTGAGACTTACATTGATGAATTGTTTGATGGGAAGCCTCACCAGTCCATTGCAAGAAGGAGAACATAA 489 0.5031 MMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLACLNHEGLNVNGKVHKPVLKERFKSFNALFDEIHRTQSTWVVKDEQLQSELRVSISGVVIPAYRAFIGRFAQIFDPGRQTEKYIKYQPEDIETYIDELFDGKPHQSIARRRT 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02207 162 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 151 IPR004140 GO:0000145|GO:0006887
Pumo5g02207 162 Pfam Exo70 exocyst complex subunit 1 147 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo5g02207 162 SUPERFAMILY Cullin repeat-like 1 150 IPR016159 -
Pumo5g02207 162 Gene3D Exocyst complex component Exo70 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02207 Pumo-Chr5 59340647 59341135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02207 1 161 EXO70 exocyst subunit family AT5G13150 71.429 2.03e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02207 K07195 - gmx:100820172 323.168