Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02206 ATGGAGAATAATAACAACCTTGCAGAGAATTCCGGTAGTAACAACAACGCCGATGAGACGGTACCTTCTTCTGTGCCCGATCATGAAGAAGCTGATCCCAAACCTGATGACGGTGCCACCGCAGAAGCGGAACCGTCATCCCCGAAGCCACGTGATGAGCCAGAGGAAGAGAAGAAAGAAGAAGTCGCGTCTCCTCCGCCATGCCTCGAGAAAGTTTCGGAAGAGATTGACCAATTTCTCAAGCAGAAAAACGATGGAAATGCAGAGAACTTTGAGATTCCTGGCTTTGTTGAGAGGTACTCGGATCTGGTGGAGGAGAAGATAATGAAATATGATGCGGAAGGCAAAGCAAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGCTTGAAACCGCGGATCGGATTTCGAAGCTGATGATGTTGCTGACTGATGATGATCATCATCATCATGTTGAACCGGAGAAAGAGATCAACGGTGGAAAAGTCTCGCTGGTGAACCGCATCACCGCGAATCACCAGCGTGTGATGTCGTATTTGGAGGAGAACTTCCGGTTTCTGATGGAAGAATCTAGAATCCCAACCGAATTGGATCCAGGAGGGAATAATAATAACAACAACAGCGACGCCAAAGGGAAACAACAGGAACAGCAAGAGGTGCAAGATCAAGAAGGAGAAAACGACGCGAATTTCCCGGGTTACTCGGAGGAAATCATTGCCAGCCTGACTAAGATAGCCGGCGAGATGATATCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCGTTCGAGGAGATTCACCAGAAGCTAGGGTTAGAGAGGATCAGCATCGACGACATGGTTCAGAAGGTGCAGTGGGAGGTTCTCGCAAGGGACATGATCCCCGCGTGGATCAACACGCTCAAGCAGTGCGCGGCGGTGTACTTCCCCGGCGAGCGGAGGCTCGCCGAGGCGGTGTTCGCCGCTAATCCTTCCGTGGCGGCGGGGCTCTTCAGCAGCCTCTCCCGCGGCGCGGTGATCCAGCTCCTCAACTTCGCCGAGGGCGCCGCCATGACGAAGCGCGCCGGGGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGACCCTCCGGGATGTGATCCCGAACATCGACGGGCTCTTCCCGAAGGAGTCCGTGGAGGAGATGAAGACAGAGATGTGCCTCGCCAAGTCGCGACTTGGCGAGGCTGCCATCTCCATCTTCTGCGACCTGGAGAACCAGATCAAGTCGGAGACCTGCGAAGACCGCGGTCCCAGGCGGCGCAGTGCACCCCCTCACACGCTACATAATGAACTACCTCAGCGTGGCGGGGGACTACAAGGAAACACTGGAGCAGGTCTTCAAGGAGCATTCCAAGATCGAGCGTGCGGACTCCACCAGCAGGCCGCCGCACGAGAACGAAGGCGACAAGCAAGCGTCGTCGTCGATCTCGCCGTTCGCGGCGCAGGTGCTGAGGGTGATGGACTTGCTGGACTCAAGCCTAGATGGTAA 1530 0.5529 MENNNNLAENSGSNNNADETVPSSVPDHEEADPKPDDGATAEAEPSSPKPRDEPEEEKKEEVASPPPCLEKVSEEIDQFLKQKNDGNAENFEIPGFVERYSDLVEEKIMKYDAEGKAKWGEVAEEDSWLLETADRISKLMMLLTDDDHHHHVEPEKEINGGKVSLVNRITANHQRVMSYLEENFRFLMEESRIPTELDPGGNNNNNNSDAKGKQQEQQEVQDQEGENDANFPGYSEEIIASLTKIAGEMISGGYESECCQVYIISRRNAFEEIHQKLGLERISIDDMVQKVQWEVLARDMIPAWINTLKQCAAVYFPGERRLAEAVFAANPSVAAGLFSSLSRGAVIQLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVIPNIDGLFPKESVEEMKTEMCLAKSRLGEAAISIFCDLENQIKSETCEDRGPRRRSAPPHTLHNELPQRGGGLQGNTGAGLQGAFQDRACGLHQQAAARERRRQASVVVDLAVRGAGAEGDGLAGLKPRW 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02206 509 Coils Coil 69 89 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 1 69 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 197 214 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 23 39 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 1 22 - -
Pumo5g02206 509 Pfam Exo70 exocyst complex subunit 303 429 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo5g02206 509 PANTHER EXOCYST COMPLEX PROTEIN EXO70 101 427 IPR004140 GO:0000145|GO:0006887
Pumo5g02206 509 SUPERFAMILY Cullin repeat-like 164 426 IPR016159 -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 426 457 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 194 232 - -
Pumo5g02206 509 MobiDBLite consensus disorder prediction 46 65 - -
Pumo5g02206 509 Gene3D Exocyst complex component Exo70 108 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02206 Pumo-Chr5 59339077 59340606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02206 41 431 EXO70 exocyst subunit family AT5G13990 39.379 4.31e-84 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02206 K07195 - gmx:100820172 593.964