Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02185 ATGGCTTCTAGTTCCAACGCCATCATCCCATGCAGCTCCTCTTCATCTCAAGAGATACCAACATATGATGTGTTTGTGAGCTTCCGTGGTGAAGACACACGCAATAACTTCACTGCTTTTCTTTTTCAAGCTCTCCATAGATGTGGCATTGTTGCCTTCAAGGATGATGAAGATCTGAAGAAAGGTGAATCCATATCACCTGAGCTGCGACAAGCCATTAAAGGCTCTCGCATTTACGTTGTGGTCTTCTCAAAGCACTATGCTTCCTCGACTTGGTGCTTGCGTGAGCTTGCATACATCGACATTTGCAGTCAAAAATGGCAAAGACCGCTTCTGCCTATTTTTTTAGATGTCAATCCTTCGTGTGTGCGAAAACAGAGTGGACTTTATAAGAAGGCCTTTGCTAAACACGAAGAAAGATTCAGACATGATAAAAAAAAGATGAAGGAAGTGCAGATATGGAAAAAAGTTCTCACAAAAGTGGCCGATCTCTCTGGTTGGGATATCCGAAACCAGCCACAAGACAAAAAGATTGAAGAAATTGTTCTATTAATAAAAAATATATTGTGTCCTTTAAGTCTTCCAAATAATCATCTAGTTGGAATGAAATCTCGTGTTCAAGAATTAGAAGAGCTTTTATGTTTAGGGTCAAATAATGATGTTCGAGTTATTGGAATTAGTGGGATGATTGGAACAGGAAAGTCAACTATTGCTCGTGCTTTATATGAAAAAATCTCTCATCAATATGTTTTTAATTGTTTTATTGATGATGTAAGCAGAATTTATCGAGATGGTACATTAGGTGTACAAAAGCAGTTACTTTCTCAGTGTTTAAATGGAAAAAATGTAGAGATTTACAATGTTTCTCATGGATCAAGTTTGGTATGGCATACGCTACACAATAAAAGGGCATTTATAGTTTTTGATAATGTTGACCAAGTTGATCAGCTAAAGATGTTTATAGGGAGTGAGACTCGGTTAATTGAATGCCTAGGTAGAGGGAGTAGAATCATCATAATTTCTAGGGATGGAAAAATATTGAAGGCGAATGGAGTAGATGATGTTTACCAAGTTGAATTGTTGGAAAAAGAAGAAGCAGTTCAGTTGTTTTGCCAAAATGCTTTCAATCATAATTCTATTAAGAGTGGTTATGAAGAGTTTATAGATGATATACTACCACATGCTGATGGCCATCCCTTAGCACTTAAGGTATTGGGCTCATATTTTTTTGACCTAAATATTCCAGAGTGGAAAAGTGCATTGGCTAAGCTAACAGAACATAAAAGTGAAAATATTAGGGATGTGTTGCGAATAGTTTTTGATGACCTGGATGACCTATGCCAAGAAATATTTCTAGATATTGCTTGCATCTTTGATAATCATAACGTGCAACATGTGAAGGAAATTCTAAATTTTCGTAAATTTCATCCTGAATGTGGCCTACAAGATCTCATTCGCAAATCACTCATAACCATTGAATATGAGGAAATTCATATGCATAGCTTGTTGAAAGATTTGGGCAAGTGGATTGTTCAAGAAAAATCATCTAAAGAGCAAAGAAATTGGAGCAGATTGTGGAAGTACCAAGATCTCCACAAAATTATGTCAAATGATATGGTAGTAAAAAATCCTGAAGTCATAGTGCTTGACAGGGATGAAGTGCTTGACAGGGATGAAGATGATGAGTATCCTAAAACAACAATGAGGGCGGATGCTTTTTCAAAAATGATTCACCTTAAGTTGCTCGTGGTTAATTATGTGGATTGTTCTGGAAGCCTCGACTATCTTTCCAATGACTTAGGATATCTTAGCTGGACAGGATATCCTTTTGAGTGTTTGCCACCATGTTTCCAGCCGGACAATCTTGTTGAGTTGTGTCTAAGTGATAGCAACATCAGACAATTATGGGAAGACAAAAAGCCTCTACCCAATTTGAGACGTTTGGATCTCTCCAATTCCAGAAATCTAATCAAGATGCCAGATTTAGGGGAGGCCATAAATCTTGAATTGGTAAATTTGAGAGGATGTATACGACTTAAGGAGATCAATCCATCCATTGGTTATCTAATAAAACTTACTGTTTTGAATTTGAATGGCTGTAGAAGTCTGATCGAGTTACCACATTTCAGAGAAGACCTAAATCTTGAAATGCTAAATTTGGACGGATGCATAAATCTTCAGGAGATCCATCCATCCATTGGTCGTCTAAGAAAGCTGACCTTTTTGGTTTTGAAAGACTGCAAAAGTCTGACCAAGTTACCAAATTGGAGAGAGGGCCTAAATCTTGAAAGCTTAAATCTTGAAGGATGTATAAAACTCGAGGAGATCAATCCATCCATCGGTCTTCTACCGAAGCTTACCTTTTTAAATTTGAAAGACTGCAAAAGTCTAGTAAGCTTACCCAACAGCATGTTGGGCTGCATGTCTCTTGAATATCTGTGTCTTTCCGGCTGTTCAAAACTCAAGTTATTAGATGAACCAAGGGATGCAGAGCCTTCAAAGAAGCTTTGTATGAGTGAAGCTCCTATTCATTCCCACTCAACATCGTTTGTCATCATTCCACCAGGTTTACATAAGGATGTAGTCAGTTGTTTGTTGGCTTCCTCATCATTTCCATTTATGCGTGAACTTGATCTACGTTTCTGCAATTTAGATCAAATTCCTGAAGTTATTGGAATTTTAAGGTGCTTAGAAATGCTAAATTTAAGTGGAAACAATTTTGCTACACTTCCCAGCTTCAAGGGGCTTTCCAAACTGTATTATTTAGACTTACAACATTGCAAGCAGTTGAAACAGTTGCCTGAGCTTCCTTCAGGAACCAACTGGCCATCAAAAACTTACACGCAGCCATGGCCTACAATAAAATCTTTTGTTTGGCCATCGTTGTCATCGTTAGAGATGAGTTATCCACCTTTTATAAACAAACAAGCAGGTTTAAATTTTTTCAACTGCCCAGAATTAGTTGAGTGGAACTGCACTAATAAGACCATTTCATGGATGAAACAAATTCTTCAGGCAGGGCGTCCATTTCTTTCAAGTATTAGTCCAGGAAGTGAAATACCAAGTTGGTTCGACTATCAGCACGTGGGCATGGCCTTGGACAGTTTATCATCTATTCATGATCAAGTCCATGATTGCTATTTTGTTTTGTGTTGTGTAGTATTTGGAGCTCCATCTGGAAGGGGAACGGTTTCATGGATGGGTCCTCCAAAAATAAAAAGAAGGTATTCTGGTTCTTTTTTGCCGGTGCTTCTCGATGAAGATCTAATCACGGACATATCAGATCACATGTGGTGGTTAGCCTGGAGGGGTACACATGTACACCTTGAACATTTCATCAGAAATTTGCAATCTAACATTAAATCGATGGCCTCAAATGGTTATGATGTTGAGGTGAAGAAATACGGGTATCATCCGATATATAAACATGATCTAGAACTATCAAACTTACCAATGATGGATAGTGGAAATTCATCGGGTCAAAAGCACTGA 3492 0.3794 MASSSNAIIPCSSSSSQEIPTYDVFVSFRGEDTRNNFTAFLFQALHRCGIVAFKDDEDLKKGESISPELRQAIKGSRIYVVVFSKHYASSTWCLRELAYIDICSQKWQRPLLPIFLDVNPSCVRKQSGLYKKAFAKHEERFRHDKKKMKEVQIWKKVLTKVADLSGWDIRNQPQDKKIEEIVLLIKNILCPLSLPNNHLVGMKSRVQELEELLCLGSNNDVRVIGISGMIGTGKSTIARALYEKISHQYVFNCFIDDVSRIYRDGTLGVQKQLLSQCLNGKNVEIYNVSHGSSLVWHTLHNKRAFIVFDNVDQVDQLKMFIGSETRLIECLGRGSRIIIISRDGKILKANGVDDVYQVELLEKEEAVQLFCQNAFNHNSIKSGYEEFIDDILPHADGHPLALKVLGSYFFDLNIPEWKSALAKLTEHKSENIRDVLRIVFDDLDDLCQEIFLDIACIFDNHNVQHVKEILNFRKFHPECGLQDLIRKSLITIEYEEIHMHSLLKDLGKWIVQEKSSKEQRNWSRLWKYQDLHKIMSNDMVVKNPEVIVLDRDEVLDRDEDDEYPKTTMRADAFSKMIHLKLLVVNYVDCSGSLDYLSNDLGYLSWTGYPFECLPPCFQPDNLVELCLSDSNIRQLWEDKKPLPNLRRLDLSNSRNLIKMPDLGEAINLELVNLRGCIRLKEINPSIGYLIKLTVLNLNGCRSLIELPHFREDLNLEMLNLDGCINLQEIHPSIGRLRKLTFLVLKDCKSLTKLPNWREGLNLESLNLEGCIKLEEINPSIGLLPKLTFLNLKDCKSLVSLPNSMLGCMSLEYLCLSGCSKLKLLDEPRDAEPSKKLCMSEAPIHSHSTSFVIIPPGLHKDVVSCLLASSSFPFMRELDLRFCNLDQIPEVIGILRCLEMLNLSGNNFATLPSFKGLSKLYYLDLQHCKQLKQLPELPSGTNWPSKTYTQPWPTIKSFVWPSLSSLEMSYPPFINKQAGLNFFNCPELVEWNCTNKTISWMKQILQAGRPFLSSISPGSEIPSWFDYQHVGMALDSLSSIHDQVHDCYFVLCCVVFGAPSGRGTVSWMGPPKIKRRYSGSFLPVLLDEDLITDISDHMWWLAWRGTHVHLEHFIRNLQSNIKSMASNGYDVEVKKYGYHPIYKHDLELSNLPMMDSGNSSGQKH 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02185 1163 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 190 - -
Pumo5g02185 1163 SUPERFAMILY "Winged helix" DNA-binding domain 431 534 IPR036390 -
Pumo5g02185 1163 Gene3D Ribonuclease Inhibitor 712 849 IPR032675 -
Pumo5g02185 1163 Gene3D Ribonuclease Inhibitor 566 711 IPR032675 -
Pumo5g02185 1163 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 167 IPR035897 -
Pumo5g02185 1163 Gene3D - 360 444 IPR042197 -
Pumo5g02185 1163 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 755 IPR044974 GO:0006952
Pumo5g02185 1163 Pfam NB-ARC domain 206 434 IPR002182 GO:0043531
Pumo5g02185 1163 SUPERFAMILY L domain-like 571 991 - -
Pumo5g02185 1163 Gene3D Ribonuclease Inhibitor 855 1015 IPR032675 -
Pumo5g02185 1163 Gene3D - 190 355 IPR027417 -
Pumo5g02185 1163 ProSiteProfiles TIR domain profile. 20 189 IPR000157 GO:0007165
Pumo5g02185 1163 SMART till_3 21 164 IPR000157 GO:0007165
Pumo5g02185 1163 Pfam TIR domain 22 185 IPR000157 GO:0007165
Pumo5g02185 1163 Gene3D - 20 189 IPR035897 -
Pumo5g02185 1163 Pfam Leucine rich repeat 875 928 IPR001611 GO:0005515
Pumo5g02185 1163 PRINTS Disease resistance protein signature 395 409 - -
Pumo5g02185 1163 PRINTS Disease resistance protein signature 640 656 - -
Pumo5g02185 1163 PRINTS Disease resistance protein signature 298 312 - -
Pumo5g02185 1163 PRINTS Disease resistance protein signature 223 238 - -
Pumo5g02185 1163 ProSiteProfiles Leucine-rich repeat profile. 896 917 IPR001611 GO:0005515
Pumo5g02185 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 454 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02185 Pumo-Chr5 58918530 58929606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02185 200 824 WRKY Transcription Factor Family AT5G45050 32.344 1.65e-76 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02185 - - vra:106756186 1132.86