Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02171 ATGGCTCTCCCCGACTCTTCTTCTCGCCGCAACTCTCTGATCCCCTCCTTCATCTACTCCTCTTCCTCCAAAACGCTCCCTCTCCACCGCATGCTCAACTCCTCCGCCGCCGCCGCCCCCTTGCCGCCGCCCGCCAACCTCGACGCCGCCGGATCACGCGGCCTCATGATTCCCTCTCCCAGCGAGTCCCGCAAGATCGAGTTGTACTCCCCCGCCTTCTACGCCGCCTGCACGGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTAGTCAAGTGTAATATGCAGATTGACCCTGCTAAGTACAAGGGTATCTCGTCTGGATTTGGAGTTTTGCTTAAGGAGCAGGGATTCAGGGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCGAGCAAGTACAAGACCTTGATTTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGATATTGCACTTTGCCCCTTTGAGGCTGTGAAGGTCCGTGTCCAAACTCAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGTCTCCCAAAATTTGTCAAATCTGAAGGCACCTTGGGGCTGTACAAGGGATTAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGATCTATAAGCATGCCATCCCCACACCAAAGAATGAGTGCACCAAAAGCTTGCAACTTGGTGTCAGTTTTGCCGGTGGATATGTTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCCAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTTATGATTGGAACTCTTACTGGAGCCCAATGGGGAATATATGATGCATTCAAAGTCTTCGTCGGACTGCCAACCACTGGTGGTCCTGCTCCTGCAGCTGCTCCAGCTCCTGGTGCTGAGCTTGCAAAGGCATAG 1122 0.5196 MALPDSSSRRNSLIPSFIYSSSSKTLPLHRMLNSSAAAAPLPPPANLDAAGSRGLMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKGISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPGAELAKA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02171 373 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 54 360 IPR044677 GO:0005315|GO:1990547
Pumo5g02171 373 Gene3D Mitochondrial carrier domain 166 351 IPR023395 -
Pumo5g02171 373 Gene3D Mitochondrial carrier domain 52 165 IPR023395 -
Pumo5g02171 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 349 IPR018108 -
Pumo5g02171 373 SUPERFAMILY Mitochondrial carrier 75 345 IPR023395 -
Pumo5g02171 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
Pumo5g02171 373 Pfam Mitochondrial carrier protein 171 257 IPR018108 -
Pumo5g02171 373 Pfam Mitochondrial carrier protein 75 158 IPR018108 -
Pumo5g02171 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Pumo5g02171 373 FunFam Phosphate carrier protein, mitochondrial 72 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02171 Pumo-Chr5 58675526 58679612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02171 7 373 Chloroplast and Mitochondria Gene Families AT5G14040 78.723 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02171 K15102 - gmx:548006 660.988