Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02112 ATGCATTGTTTGTTGGTTTGTGTCCCTCTATTGTGTGCTAAAGCAGCAGCAGCAGCAGCGATTTGGTTTGGAAGAATTGGCGTTGCAGCTGGACGAAGGGGAGGATTTGGCGAAAACGCGAGACTGCTCTCATTTCATGCTGCTCGTCAGGGACATACCGCCACTGCTAAATATCTGATTGACCACGGTGCCGATCCCACTGCAGGTGCTAAAGTAAATATAAGTGCTGGTGGAGCAACTCCTTTGCACATCGCAGCTGATAATGGAAGTCTAGAACTAATAAATTGCTTATTGAAAGCTGGAGCTGATCCTAACGTCTCTGATGAGAATGGTGGTGTCAAGCCAATACATGTTGCTGCTGCAAGTGTAAGGGGCTATCTAGGAGCTGTTGAGATATTGTTCCCCTTGACGTCCAAAGTAGACACTGTTCCTACTTGGACTATTGATGGGATTCTTGAGTATATGCAATCTGAAACTAAAAAGCAACAGGTACTGGAATCTTAA 504 0.4544 MHCLLVCVPLLCAKAAAAAAIWFGRIGVAAGRRGGFGENARLLSFHAARQGHTATAKYLIDHGADPTAGAKVNISAGGATPLHIAADNGSLELINCLLKAGADPNVSDENGGVKPIHVAAASVRGYLGAVEILFPLTSKVDTVPTWTIDGILEYMQSETKKQQVLES 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02112 167 Gene3D - 42 157 IPR036770 -
Pumo5g02112 167 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Pumo5g02112 167 ProSiteProfiles Ankyrin repeat region circular profile. 77 109 - -
Pumo5g02112 167 SUPERFAMILY Ankyrin repeat 45 138 IPR036770 -
Pumo5g02112 167 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 45 67 - -
Pumo5g02112 167 Pfam Ankyrin repeats (3 copies) 45 108 IPR002110 GO:0005515
Pumo5g02112 167 SMART ANK_2a 111 142 IPR002110 GO:0005515
Pumo5g02112 167 SMART ANK_2a 39 68 IPR002110 GO:0005515
Pumo5g02112 167 SMART ANK_2a 77 106 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02112 Pumo-Chr5 57647603 57649811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02112 43 141 Ion Channels AT2G26650 34.343 6.96e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02112 - - gmx:100798118 165.622