Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02104 ATGTTGCCTGGTGTTCTGCCTGAGAGTTTGGGGATGTGTAGGAATTTGAGTTTCTTGGACTTGAGTTCTAACAATTTGGTGGGGTATCTGCCTTCATTGCAGCTTCAGGTTCCTTGTATGATCTACTTCAATGTCAGCAGGAATAATATATCTGGTGTTCTTCAAGGATTTGGGAAAGAAAGCTGTGGTGTGAGTGCACTGGACCCTTCATTCCTGGAATTAGATGGTTTTAATGATGGTGCATACTTTGATATTCCTGTTTGGAGGTTTCAAAAGAATGCTCTCATTGGATCTGGTTTGGAAGAGACCAATACTGTTGTTGTTAGCCATGATTTCAGTTGGAACAGTTTCGTGGGATCCTTACCTTTGTTCTCTCTTGGAGATAATCTGTTTGGTGCAAATCGTAACGTCTCCTACGCACTGTCTCTCAATAATAATAAGTTCAATGGAAGTCCACCGTATCAGCTAGTTTCAAACTGTAATGACCTCAAGACATTGTCAGTTAACTTGAGTGTGAACCAACTATCCAGTGGGAATGTCCAAGCATCATTTTTGGGGTGCCTGAAGTTGACAGATTTTGAAGCAGCATACAACCAGATTGATGGGTCAATTGGACCTGGTATAGGTGACTTGATGATGCTTCAGCGTCTTGATTTAAGTGGGAACAAACTATCTGGGTCACTGCCTAATCAATTGCGAAACCTACAGAACATGAAATGGATGCTTCTGGGAGGAAACAATCTAACAGGGGGAATTCCTTCCCTACTTGGCCAATTGACTTCCCTTGCTGTTTTGAATCTGTCTCACAATGCTCTAGTTGGAACAATTCCTGCGAGTTTGTCAAATGCCAAAAGTCTTGAAACTCTGTTGCTAGATCACAACAACCTTTCTGGGGAAATACCATTAACTTTTTCTACTCTTACCAATCTTGTTCAACTGGATGTTTCTTTTAACAATCTTTCTGGTCATATTCCTCATCTTCAACACCCAAGTGTTTGTGATTCCTACAAAGGAAATGCACACCTGCACTCTTGCCCCGATCCATATTCTGACTCACCTGCATCTCTTCCAGTCCCCCTTGAAATCCAGCATACGCACAGACAGAGGAAATTAAGGACAATGGTTATTGCTGTGGTCACTTCTGCTTCTGTGACTCTCTGCACGCTTCTGGGAATAGTATTGGTGATCTTTTCTGGAAGGAGTAAATTTGCTCGGCTTAGCAGTATTAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAACTGAATTGAATTATGACAGTGTGGTCACAGCTACTGGAAATTTCAGCATCCGGTATCTAATTGGCACAGGTGGCTTTGGGTCAACATACAAGGCAGAACTGTCCCCAGGTTTTCTTGTTGCCATAAAGAGGTTGTCCATTGGTAGATTTCAAGGCATTCAACAGTTTGAAACAGAAATAAGGACATTAGGGAGAATTAGACACAAGAATCTTGTGACTCTTATTGGCTATTATGTAGGAAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGTGGGAACCTTGAAGCTTTCATACATGACAGGTCAGGGAAAAATGTGCAGTGGCCAGTTATTTACAAAATAGCAAAAGACATAGCAGAGGCCCTTGCTTACCTTCATTACTCTTGTGTTCCTCGCATTGTTCACCGGGATATCAAACCTAGCAACATCTTACTTGATGAAGATCTTAATGCCTACCTTTCAGATTTTGGTTTGGCACGACTGCTGGAGGTATCTGAAACCCATGCCACCACCGATGTGGCAGGCACATTTGGTTATGTTGCTCCAGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCAGACGTTTACAGCTTTGGTGTAGTGTTATTAGAATTGATGTCTGGAAGAAAGTCACTTGATCCATCTTTTTCTGAGTATGGAAATGGATTCAATATTGTACCATGGGCAGAGCTGCTAATGACCCAAGGGCGTTGTTCCGAGCTATTTTCATCTACTTTGTGGGAAGCAGGGCCTAAGCAAAAATTGTTGGGGCTTTTAAAGCTCGCATTAACATGCACAGAAGAGACTCTTTCTATTCGACCGTCAATGAAACTGGTTCTCGAGAAATTGAAAGAATTGAAAAGTTGA 2139 0.4198 MLPGVLPESLGMCRNLSFLDLSSNNLVGYLPSLQLQVPCMIYFNVSRNNISGVLQGFGKESCGVSALDPSFLELDGFNDGAYFDIPVWRFQKNALIGSGLEETNTVVVSHDFSWNSFVGSLPLFSLGDNLFGANRNVSYALSLNNNKFNGSPPYQLVSNCNDLKTLSVNLSVNQLSSGNVQASFLGCLKLTDFEAAYNQIDGSIGPGIGDLMMLQRLDLSGNKLSGSLPNQLRNLQNMKWMLLGGNNLTGGIPSLLGQLTSLAVLNLSHNALVGTIPASLSNAKSLETLLLDHNNLSGEIPLTFSTLTNLVQLDVSFNNLSGHIPHLQHPSVCDSYKGNAHLHSCPDPYSDSPASLPVPLEIQHTHRQRKLRTMVIAVVTSASVTLCTLLGIVLVIFSGRSKFARLSSIRRRQVVTFQDVPTELNYDSVVTATGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAELLMTQGRCSELFSSTLWEAGPKQKLLGLLKLALTCTEETLSIRPSMKLVLEKLKELKS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02104 712 Gene3D Ribonuclease Inhibitor 109 260 IPR032675 -
Pumo5g02104 712 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 400 511 - -
Pumo5g02104 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 709 - -
Pumo5g02104 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Pumo5g02104 712 ProSiteProfiles Protein kinase domain profile. 436 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02104 712 SUPERFAMILY L domain-like 6 328 - -
Pumo5g02104 712 ProSitePatterns Protein kinases ATP-binding region signature. 442 464 IPR017441 GO:0005524
Pumo5g02104 712 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 105 349 - -
Pumo5g02104 712 PRINTS Leucine-rich repeat signature 214 227 - -
Pumo5g02104 712 PRINTS Leucine-rich repeat signature 259 272 - -
Pumo5g02104 712 Gene3D Transferase(Phosphotransferase) domain 1 512 711 - -
Pumo5g02104 712 Pfam Protein kinase domain 441 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02104 712 SMART serkin_6 436 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02104 712 Gene3D Phosphorylase Kinase; domain 1 398 511 - -
Pumo5g02104 712 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 512 712 - -
Pumo5g02104 712 Gene3D Ribonuclease Inhibitor 1 70 IPR032675 -
Pumo5g02104 712 Gene3D Ribonuclease Inhibitor 261 353 IPR032675 -
Pumo5g02104 712 SUPERFAMILY Protein kinase-like (PK-like) 414 707 IPR011009 -
Pumo5g02104 712 Pfam Leucine rich repeat 261 320 IPR001611 GO:0005515
Pumo5g02104 712 CDD STKc_IRAK 442 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02104 Pumo-Chr5 57519372 57523582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02104 4 711 Receptor kinase-like Gene Family AT3G02130 47.613 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Pumo5g02104 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02104 - - gmx:100795047 1238.79