Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g02102 | ATGTCAAGTACTCTTGCAACAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATGGCTATAATACTTATATGGTTTTGTTTGTCTCGTGAAAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCAAGTGGGAAGGCATGGTGCAATTGAGTTGCCTATACGAGATACTAGGCGATTTGAGATGGAAGAACTATCTGTGGCCACAAAAAATTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTTGGGGAGGTATATAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGCGGACTTGCTAGTCAGGAATTTGTTGATGAGGTACGCTATCTCTCATCTATTCACCATCGAAATCTCGTCAGTCTTTTAGGCTACTGCCAGGAGAACAATCTTCAATTTCTTATATATGAATATGTGCCTAATGGAAGTGTCTCCAGTCACTTGTATGGCGCTGGTCAACAACCGCGAAAGAAGCTAGAATTTAAGCATAGACTTAAAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTCCACTCTTTGAGTCCCCGTTTGGTGCATAAAGATTTCAAAACCGCCAATGTTCTTGTGGATGAAGACTTCATTGCTAAGGTGGCAGATGCTGGACTTCGCAATTTTTTGGGGAGAGCTTACATTGCAAGCTCCTCTTCTCAAGTGGCAACAGATGAAATATTCCTTGCATCAGAGGTGAAAGAGTTTAGACAATTTTCTGAAAAGAGCGATGTATACAGCTTTGGAGTATTTTTGCTAGAATTGTTAAGTGGGAAAGAAGCAATAGAATCGCCATCTCCGGACTCTAATCAAAATCTGGTTGAATGGGTGCTAAGCAATCAAGACCGTGGCATGATGTCTTACATTATTGATCGGAGATTGGAGAGTAGTTTTACAGCTGAAGGCATGGAAGACTACTTTATGCTCATAATTAGATGCTTAGATCCTTCAAGTGAGAGGCGACCTACCATGAGCTATGTGGAAATGGAACTTGATCGGATCCTTGAGAAGGAAATGAACTTGACAACAATCATGGGAGAAGGAACAACAACTGTGGCTCTTGGAAGTCAGTTATTCAAATCAACAAAATAA | 1140 | 0.4175 | MSSTLATIFGGAAGAVALVGMAIILIWFCLSRERNVSRTSETGSSDPSQVGRHGAIELPIRDTRRFEMEELSVATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQPRKKLEFKHRLKIAQGAAKGLAHLHSLSPRLVHKDFKTANVLVDEDFIAKVADAGLRNFLGRAYIASSSSQVATDEIFLASEVKEFRQFSEKSDVYSFGVFLLELLSGKEAIESPSPDSNQNLVEWVLSNQDRGMMSYIIDRRLESSFTAEGMEDYFMLIIRCLDPSSERRPTMSYVEMELDRILEKEMNLTTIMGEGTTTVALGSQLFKSTK | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g02102 | 379 | FunFam | Protein kinase superfamily protein | 151 | 364 | - | - | |
Pumo5g02102 | 379 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524 | |
Pumo5g02102 | 379 | ProSiteProfiles | Protein kinase domain profile. | 78 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g02102 | 379 | FunFam | Protein kinase superfamily protein | 43 | 150 | - | - | |
Pumo5g02102 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 366 | - | - | |
Pumo5g02102 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 197 | 209 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g02102 | 379 | Pfam | Protein tyrosine and serine/threonine kinase | 82 | 346 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo5g02102 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 50 | 150 | - | - | |
Pumo5g02102 | 379 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 14 | 356 | IPR047117 | - | |
Pumo5g02102 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 345 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g02102 | Pumo-Chr5 | 57479910 | 57482697 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g02102 | 64 | 352 | Receptor kinase-like Gene Family | AT1G30570 | 40.678 | 2.06e-63 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXa | Pumo5g02102 | PK_Tyr_Ser-Thr | 3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g02102 | - | - | gmx:100305436 | 686.797 |