Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02054 ATGGGAACCACTTGCCTAGAATCTCCACCACTTCTCCAAGACCTAAAGGTGACCATCCACGAAACTTCAATGGTTTTTCCATCCAAAGAAACCGAGAAGAGGTCCTTGTTCCTATCAAACATTGACAAGGTCCTCAACTTCGAAGTGGAAACGGTTCACTTCTTTGCGGCAAACAAAGATTTTCCACCCCAAAGAGTGGCCAAGATGTTCAAGAACGCTCTAGAGGATGCCCTAGTGGTCTATGACTTCTTGGGGGGAAGATTGAAGGTGAACCCCGAAACCAAGAGATTAGAGATTGATTGCAACGCAAAGGGTGCTGGGTTTGTGGTGGCTTCAAGTGAGTACAAGCTGAGTGAGATTGGGGACTTGGTTTATCCCAATCCAGCTTTTGCACAGTTTGTTTACAAGAGTAACGATTTCCTTCAACCAGATGATCAACCACTATGTGTTGCACAGCTGACATCCTTCAAATGTGGAGGCTTCGCAATAGGGTTCACAACCAGCCACACAACCTTTGACGGTCTTAGCTTCAAAACATTCTTGGACAACCTTGCCGCACTGGCTGCTAACAAGCCCTTGGCTGTCATACCCTGCCACGACAGACACCTCCTTGCCGCACGATCCCCGCCACGTGTCAGCTTCCCGCACCCCGAGTTGATCAAGCTCGATAACCTACCCCCAGGCATCGAGTCCTCGGTCTTCGAGGCCACCAAGGAAGAACTCGACTTCAAAGTTTTCCAACTAACCTCAGACAACATCCTCAGCCTCAAGGAGAAAGCCAAGGGCAGCACCAACGCCCGTGCCACCGGGTTTAACGTTATCACTGCCCATATATGGAGGTGCAAGGCCTTATCTGCAACCCACGACCCCTCTAGGTCATCCACCGTACTATATGCCGTGGACATACGTCCACGGCTGAATCCTCCCTTGTCCAAATTCTTCGCGGGCAACGCCGTGTTAACAGCATACGCCACGGCGAAGTGCGACGAATTGGACAAAGGAGAATTCTCGAGATTGGTTGAGATGGTGACGGAGGGTGCAAAGAGAATGAGTGATGAGTACGCAAGGTCTATTATAGACTGGGGAGAGGTGCATAGTGGGTTTCCACATGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCTTGGGGGAAGCCAAAGTATTGTTGTCCCGTGGTGTATCACAGGAAGGATATTATTCTAGTGTTTCCTCCTTATGGTGGTGGTGACGATGATGGGATAAATATTATAGTGGCTCTTCCTCCCAAGGAAATGGACAAATTCGAGAGTCTCTTCTACACGCTCTTGACTTGA 1335 0.4944 MGTTCLESPPLLQDLKVTIHETSMVFPSKETEKRSLFLSNIDKVLNFEVETVHFFAANKDFPPQRVAKMFKNALEDALVVYDFLGGRLKVNPETKRLEIDCNAKGAGFVVASSEYKLSEIGDLVYPNPAFAQFVYKSNDFLQPDDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHPELIKLDNLPPGIESSVFEATKEELDFKVFQLTSDNILSLKEKAKGSTNARATGFNVITAHIWRCKALSATHDPSRSSTVLYAVDIRPRLNPPLSKFFAGNAVLTAYATAKCDELDKGEFSRLVEMVTEGAKRMSDEYARSIIDWGEVHSGFPHGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILVFPPYGGGDDDGINIIVALPPKEMDKFESLFYTLLT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02054 444 Gene3D - 11 220 IPR023213 -
Pumo5g02054 444 Gene3D - 229 442 IPR023213 -
Pumo5g02054 444 Pfam Transferase family 15 440 - -
Pumo5g02054 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02054 Pumo-Chr5 56753796 56756615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02054 15 442 Monolignol Biosynthesis Gene Families AT5G48930 29.730 2.64e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02054 K13065 - gmx:100780971 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02054 5 56753796 56756615 Pumo6g02174 6 40244732 40251081 PCT