Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02046 ATGAGCATGTATTATCTAATCCTGGTTCCTCTTCCTCTGTGGACGGTGCTTGCAACTGCAACTGCAACTGCAAGTTCTTCCTCCCATCGCAAATTGTCTCCCAATTATCCCATAATTCAGAAAAGCATTGAGGAATCCTATGCAGTTATATTCGATGCTGGTAGCACGGGAAGCCGTGTACATGTCTACCGTTTTAACCAGCAATTAGATCTCCTTCGTATTGGCCAAGACCTTGAACTCTTCGTCAAGACTAAGCCAGGTTTAAGTGCGTACGCTGAGAATCCAGAAGAAGCTGCAGAATCTCTTATTCCACTTTTGGAGAAAGCAGAAGCTGTTGTTCCTGAGGAGTTGCACCCCAGGACGCCCGTTAAACTTGGAGCAACTGCAGGTTTAAGGCAATTGGAAGGGGATGCTTCTGATAGGATCTTGCAGGCGGTTAGTGACATGCTCAACAACAGAAGCACACTGAACGTTGGGGCCGATGCAGTTTCAGTGTTGAGTGGAAACCAGGAAGGAGCTTATCAATGGGTAACTATTAACTATCTACTGGGAAACTTGGGAAAGCATTATTCAAAGACGGTTGCTGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCTTACGCAATCTCAGAGACAGATGCTGCGAAGGCTCCACAAGCACAAGACGGAGTGGAATCATACATAACGGAGATGTTCCTCAGGGGAAAGAAATATTACCTCTATGTACACAGTTACTTGCGCTATGGTTTGCTAGCAGCTCGTGCAGAGGTTTTAAAGATTTCTCGTGATTCTGAAAATCCTTGTATTTTGGCTGGCTTTGATGGGTATTACAAATATGGAGGAGTGCAGTATAAAGCCACAGCTCCCCCTTCTGGCTCAAGCTTCAGTGAATGCCAAAATGTTGTTCTTGAAGCTCTCCATGTTAATGCAACATGCTCTTACAAGGATTGCACTTTCGGTGGGATATGGAATGGTGGTGGAGGAGCTGGAGAAAACAACTTTTTTGTTGCCTCATTTTTCTTTGAAGTGGCCGATGAGGCTGGTTTTGTTGATCCAGACGCCCCCAATGCCAAAGTTCGTCCTGTGGATTTTGAGGATGCAGCAAAGGTTGCTTGTAACACAGAATTAAAGGATCTCAAGTCCATTTTCCCTCGTGTTAAGGATGGAGACGTTCCTTATATATGTTTGGATCTTGTATACGAATATACATTGCTCGTTGATGGATTTGGCATTGATCCCCAGCAAGAGATTACATTGGTGAGGCAAGTTCAGTATGAGGATTTTCTCGTGGAAGCAGCATGGCCTCTAGGCAGTGCCATAGAAGCCATCTCATCATTACCTAAATTTGAGAAATTAATGTATTTCGTTTAA 1374 0.4425 MSMYYLILVPLPLWTVLATATATASSSSHRKLSPNYPIIQKSIEESYAVIFDAGSTGSRVHVYRFNQQLDLLRIGQDLELFVKTKPGLSAYAENPEEAAESLIPLLEKAEAVVPEELHPRTPVKLGATAGLRQLEGDASDRILQAVSDMLNNRSTLNVGADAVSVLSGNQEGAYQWVTINYLLGNLGKHYSKTVAVVDLGGGSVQMAYAISETDAAKAPQAQDGVESYITEMFLRGKKYYLYVHSYLRYGLLAARAEVLKISRDSENPCILAGFDGYYKYGGVQYKATAPPSGSSFSECQNVVLEALHVNATCSYKDCTFGGIWNGGGGAGENNFFVASFFFEVADEAGFVDPDAPNAKVRPVDFEDAAKVACNTELKDLKSIFPRVKDGDVPYICLDLVYEYTLLVDGFGIDPQQEITLVRQVQYEDFLVEAAWPLGSAIEAISSLPKFEKLMYFV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02046 457 CDD NBD_sugar-kinase_HSP70_actin 49 208 - -
Pumo5g02046 457 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 166 181 IPR000407 GO:0016787
Pumo5g02046 457 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 6 447 IPR000407 GO:0016787
Pumo5g02046 457 Gene3D Exopolyphosphatase. Domain 2 167 427 - -
Pumo5g02046 457 Gene3D - 47 441 - -
Pumo5g02046 457 Pfam GDA1/CD39 (nucleoside phosphatase) family 41 449 IPR000407 GO:0016787
Pumo5g02046 457 FunFam Apyrase 1 167 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02046 Pumo-Chr5 56610630 56618891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02046 45 446 Calmodulin-binding Proteins AT3G04080 64.268 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02046 K14641 - gmx:100787491 784.637