Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02044 ATGGACTTCCTAACCCTCATCATCACTTTTCTACTCTTCTTAGTGCCAGCAACCTCTTCTTCCCAATATCTTCTGGGGAACAAGAAAAACCTACTCACACATCGCAAGATATTCCTCAAAGAGGACAACCTTACCTCTTACGCTGTTATCTTTGACGGTGGTAGCACTGGGACACGTGTGCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCCCATTAATGATAGTCTCGAATTTTATAAAAAGATCACACCGGGTTTAAGTTCATATGAGGATGATCCTGAAGAAGCTGCAGAATCTCTTATTCCACTTTTGGAGGAAGCAGAAAGTTTGGTCCCTGAGGACTTGCGCCCCAACACACCCGTTAGGCTTGGGGCGACTGCGGGTTTAAGGCTGTTGGAAGGGAATGCTTCTGAAGAAATATTGCAAGCGGTTAGGGACATGCTGAGTAGCAGAAGTACACTGAACCTACAATCTGATGCAGTAGCTATTCTTGATGGAACTGAAGAAGGTTCCTATATGCGGGTGGCAATGAACTATCTATTGGGAAAGTTGGGAAAAAGGTATTCAAAGACTGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCAGTCTCAAAGAATACAGCTAAAAATGCTCCACAAGCACCAGAAGGAGAAGACCCATACATAAAGACAATTGTAGTTAATGGAAAAACTTATGACCTCTATGTTCACAGTTACTTGCACTTTGGTAAAGAGGCATCTCGTGCGGAGATGTTGAAGGTCACTGGTGATTCAGCTAACCCTTGCATTTTAGCCGGTTTTAATGGGACCTACACATATTCGGGAGTTGAATATAAGGCCTTGGCCTCCGCTTTTGGTTCCAATTTCGATGAATGTCGAGAGATAGCTCTTAAAGCTCTCAAAGTGAATGAACCATGCCCTCATCAGAAGTGCACTTTTGGAGGGATATGGAACGGTGGAGGGGGAAGCGGACAAAAAACCCTTTATGTTACTACATCTTTCTATTACCTAGTTATACAGGCTGGTATCGCTGATGCAAATGAAACCAGTTCCAAAGTTTATCCTGCGGAATTCAAGGCAGCAGCTAAGCGAGCTTGTGAAGTAAAACTTGAGGATGCCCAATCCACTTATCCACTTATGGCGGAGGATGCACTTCCATACATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGGCCTAGATCCATGGCACGAGATTATAGCAGCAAATGAAATTGAATATCAAGGTGCTCTTGTGGAAGCAGCATGGCCCCTAGGAAGTGCCATAGAAGCCATATCATCATTGCCCAAATTTAAGCCATTGATGTATTTTATTTAA 1374 0.433 MDFLTLIITFLLFLVPATSSSQYLLGNKKNLLTHRKIFLKEDNLTSYAVIFDGGSTGTRVHVFHFDQNLDLLPINDSLEFYKKITPGLSSYEDDPEEAAESLIPLLEEAESLVPEDLRPNTPVRLGATAGLRLLEGNASEEILQAVRDMLSSRSTLNLQSDAVAILDGTEEGSYMRVAMNYLLGKLGKRYSKTVGVVDLGGGSVQMAYAVSKNTAKNAPQAPEGEDPYIKTIVVNGKTYDLYVHSYLHFGKEASRAEMLKVTGDSANPCILAGFNGTYTYSGVEYKALASAFGSNFDECREIALKALKVNEPCPHQKCTFGGIWNGGGGSGQKTLYVTTSFYYLVIQAGIADANETSSKVYPAEFKAAAKRACEVKLEDAQSTYPLMAEDALPYICMDITYQYTLLVDGFGLDPWHEIIAANEIEYQGALVEAAWPLGSAIEAISSLPKFKPLMYFI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02044 457 Pfam GDA1/CD39 (nucleoside phosphatase) family 41 448 IPR000407 GO:0016787
Pumo5g02044 457 CDD NBD_sugar-kinase_HSP70_actin 49 208 - -
Pumo5g02044 457 Gene3D Exopolyphosphatase. Domain 2 167 425 - -
Pumo5g02044 457 Gene3D - 47 441 - -
Pumo5g02044 457 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 7 447 IPR000407 GO:0016787
Pumo5g02044 457 FunFam Apyrase 1 167 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02044 Pumo-Chr5 56432112 56445564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02044 46 446 Calmodulin-binding Proteins AT3G04080 56.468 6.35e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02044 K14641 - gmx:100784833 788.104