Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02041 ATGGTTTTGCTCTGGTCAAGAGGGACTAAGAACATGGACTTCCTAACCCTCTTCACTCTTCTAATCTTGTTTTTAATGCCTGAATTCTCTTCTTCCCAATATCTTGGGAACATCTTACTCACTCATCGTAAGATTTTCCCCAAACAGGAAGCCCTTACCTCTTACGCTGTCATCTTTGATGCTGGTAGCACTGGTAGCCGCGTGCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCATATTGGCAACGAACTTGAGTTTTATGATAAGGTCACACCCGGTTTGAGTGCATACGCGGATAATCCTCAAAAAGCCGCAGAATCTCTCGTTCCACTTTTAGAGGAAGCTGAAAGTGTTGTCCCTGAGGACCTGTACCCCATGACACCCGTTAAGCTTGGGGCGACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGGGATTTGCTCAAGAACAGAAGTACCCTGAATGTTCAACCAGATGCTGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAATTAACTATTTATTGGGGAAGTTGGGGGAAAAGTTTTCAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCGTCTCAAGGAACACAGCAAAAAATGCTCCAAAAGCACCAGATGGAGAGGAACCTTACATAAAGAAGCTTGTAATCAAGGGAAAGGAATATGACCTCTATGTTCACAGCTACTTGCGTTATGGTAGAGAAGCATCTCGTGCCGAGATTTTGAAGGTCACTGATGGTGCTGCAAACCCATGTATTTTAGCTGGCTTTGATGGGACCTACACATATTCAGGAGTAGACTATAAGGCCTTTGCTCCCATTTCTGGCTCCAACTACGATGAATGCAGAGAGATAGTTCTTCAAGCTCTCAAATTGAATGAGTCATGCCCTCATCAAAATTGCACTTTTGGTGGGATATGGGATGGTGGAAGGGGAGGTGGACAGAAAATTCTTTTCGGCACTGCATCTTTCTATTATCTGCCTACGGAGGTTGGTATCGCTGATCCAAATAAACCCAACTCCAAAATTCGTCCAGTGGATTTAGAAACTGAGGCTAAGCGAGCTTGTGAAACAAAACTTGAGGATGCCAAATCCACTTATCCAAATCTTGCGGAGGATAGACTTCCATATGTATGCTTGGATATTACATACCAGTATGCATTGCACACTGAAGGATTTGGCCTTGATCCATGGCAAGAGATTACAGTGGCTAATGAAATTGAATATCAGGATGCTCTTGTGGAAGCAGCATGGCCTTTAGGCACTGCCATAGAAGCCATATCGTCATTGCCTAAATTTGATCCATTAATGTATTTTATCTAA 1398 0.4328 MVLLWSRGTKNMDFLTLFTLLILFLMPEFSSSQYLGNILLTHRKIFPKQEALTSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNELEFYDKVTPGLSAYADNPQKAAESLVPLLEEAESVVPEDLYPMTPVKLGATAGLRLLDGDASERILQAVRDLLKNRSTLNVQPDAVAIIDGTQEGSYLWVTINYLLGKLGEKFSKTVGVVDLGGGSVQMAYAVSRNTAKNAPKAPDGEEPYIKKLVIKGKEYDLYVHSYLRYGREASRAEILKVTDGAANPCILAGFDGTYTYSGVDYKAFAPISGSNYDECREIVLQALKLNESCPHQNCTFGGIWDGGRGGGQKILFGTASFYYLPTEVGIADPNKPNSKIRPVDLETEAKRACETKLEDAKSTYPNLAEDRLPYVCLDITYQYALHTEGFGLDPWQEITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDPLMYFI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02041 465 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 456 IPR000407 GO:0016787
Pumo5g02041 465 CDD NBD_sugar-kinase_HSP70_actin 57 216 - -
Pumo5g02041 465 Gene3D - 55 449 - -
Pumo5g02041 465 Gene3D Exopolyphosphatase. Domain 2 175 433 - -
Pumo5g02041 465 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 55 184 - -
Pumo5g02041 465 FunFam Apyrase 1 175 433 - -
Pumo5g02041 465 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 174 189 IPR000407 GO:0016787
Pumo5g02041 465 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 455 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02041 Pumo-Chr5 56311326 56317059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02041 54 454 Calmodulin-binding Proteins AT3G04080 57.214 1.63e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02041 K14641 - gmx:100781628 852.432