Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01993 ATGGTGAGCGTTGAATCTCGTTACACCGTGTTCCCCTCTAAACCCACCCCCAATGAAAAACTCTACTCCTTGTGCGAACAAATCAAGCTTCGCACTCACGCGCCTCTCCTTTACGTGTACAAGCCACACCCTCATCACGATGCACCAACCTTTGTTAACACCTTGAGGGACTCTCTTAGCCAAGCTTTGGCTATCTACTACCCACTTGCGGGTAGGTTGAGTTTGATCGAAGGTGGACGATGGGAGCTTCATTGCAATGTAAAGGGAGCACAACTCTTGGAAGCCAATTGCAAAGATTCGAATTTGGATGACTTGGGTGATTTTGTGCCTTCCCATTTGGTGTCACAACTCATACCCAACATTGATTACAATGTTCCCATTGAGGACACGCCTTTGTTGGTTGCGCAGTTAACAAGGTTCCCTTGTGGTGGCGTTACGATTGGGGTGGCTTTATGTCGCGGCGCAATTGATGGAACTGCAACTATGCGATTCATGAGCACGTGGGCCAAGTTGGCTAGGAAGGAAAAATTGGACCATGAGGAAATGATGCCGTACCATGATCGAAATATGTTAAATTCGTATAAAGTTGATTCGGGGTCGCACGATCATTCGGAGTTTGGCACTCCTCCTAATTGGTTAGGTTCATTAGGAGGCAGAGACACCAAGGTTGTGATTGAAATAGTGAAACTCACGAATGAACAAGTGAAGAAGATCAAGCACAAGGGGAGTTATGTTAACATTAACACTAGTCCTAGTCCTAGACCTTATTCAACTTTTGAGGTCATTGCAGGGTACTTGTGGAGGTGTGTGAGTAAAGCACGCTATGAGGGCAAAAGTGACCAACCTACGAGGTTGTCCACTTTGGTTAACTGTAGGAACCGAATGAGTCCACCACTTCCTGGTGGGTATGCGGGAAATGCAGCATTTCCCACAGTGACACCAACATGTTCTTTTGGTGAAATCATGAATAGGCCTTTGAGTTATGCGGTTGGGAACGTTAGGGTGGCACTTGAAAGGGTGACAGGGGAGTTTGTGGGGTCAGCGCTTGATCACATAGCAAAGGAGAAAGACATGAATTTGGTGAGGTTCAATTTTCACTACCCTGCCCCAAGTGTGCATAAGGGACCATACAAGGGGAATTCGAACCTTTTTGTTGTTAGTTGGATGAATTTCTCGTATAAGGATGCGGATTTTGGATGGGGGAAGCCTGTGTATTTTGGCCCCGGGTTCATGGATTCCGAAGGGAAGGCATTTGTTATGAATAAGGCTAATGGGGATGGCCTCATTGTGGCCATTTCTTTGGAAGCATCTCACATGGTTGCTTTCAAGAATTTTTTTTACGGTGATATCCAAGAAGAGGAATTTCCTATTTCCAAACTGTGA 1383 0.4584 MVSVESRYTVFPSKPTPNEKLYSLCEQIKLRTHAPLLYVYKPHPHHDAPTFVNTLRDSLSQALAIYYPLAGRLSLIEGGRWELHCNVKGAQLLEANCKDSNLDDLGDFVPSHLVSQLIPNIDYNVPIEDTPLLVAQLTRFPCGGVTIGVALCRGAIDGTATMRFMSTWAKLARKEKLDHEEMMPYHDRNMLNSYKVDSGSHDHSEFGTPPNWLGSLGGRDTKVVIEIVKLTNEQVKKIKHKGSYVNINTSPSPRPYSTFEVIAGYLWRCVSKARYEGKSDQPTRLSTLVNCRNRMSPPLPGGYAGNAAFPTVTPTCSFGEIMNRPLSYAVGNVRVALERVTGEFVGSALDHIAKEKDMNLVRFNFHYPAPSVHKGPYKGNSNLFVVSWMNFSYKDADFGWGKPVYFGPGFMDSEGKAFVMNKANGDGLIVAISLEASHMVAFKNFFYGDIQEEEFPISKL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01993 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 445 - -
Pumo5g01993 460 Gene3D - 1 208 IPR023213 -
Pumo5g01993 460 Gene3D - 217 448 IPR023213 -
Pumo5g01993 460 Pfam Transferase family 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01993 Pumo-Chr5 55583002 55584672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01993 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.361 7.18e-79 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01993 K13065 - gmx:100775549 820.461