Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01992 ATGGTGAGCGTTAACGTTGAATGTTGTTACACCGTCTTCCCCTCGGAACCCACCCCGAATGCAAAGCTCTACTCGTTATGCGAACAAATCAAGCTTCGCACTCACGCGCCTGTCATTTACGTGTACAAGGCACACCCCCATCACGACGCATCGACCTTGGTTAACACGCTGAGGCACTCTCTCAGCCAAGCCCTGACCATCTATTACCCACTTGCGGGAAGGTTGAGTTGCATCCAAGGGGGCCAATGGGAGCTTCATTGCAATGCCAAGGGAGCACTACTCTTGGAAGCCAATTGCAAAGAAGAAGCCAATTTATTGGATGATTTTGTGCCTACACATAAATTGGTGTCACAACTCATACCCAAGGTTGATTACAATGTTCCAGTTGAGGACACGCCTCTTATGGTTGCGCAGTTAACAAAGTTCCCGTGTGGCGGGGTTACTCTTGGGGTCACCATATGTCGCGCCGTAACTGATGGAACCGCGTCCATGTTGTTTGCGAGCACGTGGGCCAAGTTGGCTAGGAAGGAAAAATTGGACCACGTGGAAATGATGCCATGCCATGATCGAACTGTGTTAAATTCATACAAGCTAATTCCTTCAGGGTTGCACCAGAAGTACGACCATTCGGAGTTTCGCTTTCCACCTCTTTGGTTAGGTCCCGAGGGTGGCAGAGACACCAAGGTTGTGGTTGCAATAGTGAAGCTCACGGGTGAACAAGTGAAGAAGCTCAAGCGCAAGGGGAATTACGCTAACATAACAGACATTACTACTAGTCTGCGACGACCTTATTCAACTTTTGAGGTTATTGCCGGTTACTTGTGGAGGTGTGTGAGTAAAGCACGTTATGAAGGGAAAAGTGACCAACCTACGAGGTTGTCCACTTTGGTTGATTGTAGGAACCAAATGAGGCCACCGCTTCCTGTTGGGTATGCGGGAAATGCAGTGTTTCCCACAGTGACACCCACATGTTCCTTTGGTGAAATCATGAATAGGCCTTTGAGTTATGCGGTTGGGAACGTTAGGGTGGCACTTGAAAGGGTGACAGGGGAGTTTGTGGGGTCAGCGCTTGATCACATAGCAAAGGAGAAAGACATGAACTTGGTGAGGTACAATTTTCACTACCCTGCGTCAAGTGTGCATAAGGGACCGTACAAGGGGAACCCGAACCTTTTTGTTGTTAGTTGGATGAATTTCTCGTATAAGGATGCGGATTTTGGATGGGGGAAGCCTGTGTATTTTGGCCCCGGGTTCATGGATTCCGAAGGGAAAGCATTTGTTATGAACAAGGTTAATGGGGATGATCTCATTGTGGCCATTTCTTTGGAAGCAACTCACATGGATGCTTTCAAGAAATTTTTTTACGGTGATATCCAAGAAGAGGAATTTCCTATTTCCAAACTGTGA 1407 0.4762 MVSVNVECCYTVFPSEPTPNAKLYSLCEQIKLRTHAPVIYVYKAHPHHDASTLVNTLRHSLSQALTIYYPLAGRLSCIQGGQWELHCNAKGALLLEANCKEEANLLDDFVPTHKLVSQLIPKVDYNVPVEDTPLMVAQLTKFPCGGVTLGVTICRAVTDGTASMLFASTWAKLARKEKLDHVEMMPCHDRTVLNSYKLIPSGLHQKYDHSEFRFPPLWLGPEGGRDTKVVVAIVKLTGEQVKKLKRKGNYANITDITTSLRRPYSTFEVIAGYLWRCVSKARYEGKSDQPTRLSTLVDCRNQMRPPLPVGYAGNAVFPTVTPTCSFGEIMNRPLSYAVGNVRVALERVTGEFVGSALDHIAKEKDMNLVRYNFHYPASSVHKGPYKGNPNLFVVSWMNFSYKDADFGWGKPVYFGPGFMDSEGKAFVMNKVNGDDLIVAISLEATHMDAFKKFFYGDIQEEEFPISKL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01992 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 454 - -
Pumo5g01992 468 Pfam Transferase family 4 454 - -
Pumo5g01992 468 Gene3D - 1 213 IPR023213 -
Pumo5g01992 468 Gene3D - 220 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01992 Pumo-Chr5 55576548 55577954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01992 2 455 Monolignol Biosynthesis Gene Families AT5G48930 34.416 3.83e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01992 K13065 - gmx:100775549 762.296