Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01971 ATGAATTCCTCCGACTTCGGAACCTCTGATTTCATTATCATAAACTCGAACGACACGCTGCAGGTCTGTTTCAATAGTAGTGAATACCACGGTTCTGGCCTTTGGATAGAAAACTCCGTGGAGAAAACACTCCCTTCATTTGTCCTGCAATTGGCAATTATCCTAGCAATCAACCGATTTTTGCTCCTTGTTTCAGAACAATACCTTGTACCTCGTATTGTTGCCAATATTTTTACTGGTTTTCTACTGGGTCCATCTGTTCTGGGACGTTGGCATGCTTTTATGAAAAACGCATTTCCTTTCAGTAACATGATACCATTGGAGACCGTGGGAGGGATGGTCCTTGTTTACTACGTGTTCTTGGTGGGTCTAGAGATAGACTTGAAACCAATATCGAGGTTGCACAAGAAGGCCATGGTTATTGCCATTGCCAGCACAATCTTCACCTTACCAATGGGGTTTGGCTTGTACTACATGCTTGTCACCGACATGGGGCGAAAATCATTGTCCCATGTCAATGCTAGACCAAAGGGTGCAATATTATGGGGAATCACCCTTTCATGCAGCAGTGAGTTCCCTGAGATTGCAAAGATCCTTTCAGACCTCAAGCTTCTCCTCACGGAGAATGGACAACTGGCTCTCACAGCTTCCCTCATCAATGACTTGTTTTCATGGACCCTTCTTGTGTTGGCTCTAACGCAATTCTATTATGCTGCCGTGTCATCGTTTGTCATCACGGTCATGCTTGTGTTGATTTGTTATGTGGCACTTCACCCCTTTTTCAAGTGGCTATTCAACAATGTGGGCACAGGGGATCGTGAGTTCCTTGAGTCACAAGTAATCTTTGTGCTGCATGTAGTTTTGGTCATGGGGCTTTTAACTGATGGGTTGGGTGTGCTTTCCATCACTGGGGCTTTCTTTTTGGGTGTTGTGATCCCTCAGGGTGCGCTCAACAATGCGGTACAGGACAAGGTGCAGGATTTTGTGTCTGTGTTCATGATGCCTTTGTTCTTTGTGGCTGTTGGAGAGAGAATTAAGATCCAAGACTTGGCCTTGGACACTCATTGTACAACTGTGGTGGTGGTTGTTGTGTTGGCATTGGTGTCAAAGATTGTGTGCACTATGGTGGTCTCTTGGTTCTACCAGATGCCACACTTGGAAGGATTATCCCTTGCACTGCTCATGAATACTAAAGGAATAATGCCATTGATCGTTCTCTGCACCGGCAGGGACAGACGCGAACTGGACAACCAGACCTTTGGGGTGATGCTATTAGCATGCTGGTTGATGACAATTCCCGTGGGACCAGTCTCATCCGCTTTAACAAAAGCCCTGAAAAGCAGAAAGGTTCTGGGAGGCCAACGCAGGAGCATGCAAGACACACAACCAGACGCACCCCTCAGACTATTAGCCTGCATCCACACAAAGCGCGACGCCAACGTCATCATCAACCTCCTAAAAGCCTCGTGCCCCTCAGTGAGAGCCCCAATCCAAGTGCTTGCAGTGGAACTGAACAAAATGACCAACCGCCCCACCGCATCACTCATCATAAGAGACGCTCGAAAACCCTCCTTCACCTCAAAATCCTCGAAGCTCGACACCGAAGACACCCTCGGCAGCTTCGACAACCTCAGCCAAGCCATCTTCGCTGAAAAAATGAGAATAATTTCAGACTACAGCTCCATGCACAAGGACATCTTAAACCTCGCAAAGCGTAGAGGGGTGACACTTATCTTAACCACACTTTGCAAGCAACCGACTTATGACGGTTTAGGAGCTGGAGTTGCAACTGCAAGAGCTGTTAACATCATTAACCGCGACCATGAAAGCAAAGACGAGAAGAAAGTGGTGCTGGAGAGTCTAGTTAGGGATGCAAAGTGTTGTGTGGCCATATTTGTGGACAGAGGGTTGAGTCACAAACGTTCAAAGGAGCATCGTGTGGCTATGCTTTACATTGCCGGTGCCGATGACCGCGAAGCGCTTTCGTACGCATGGAGGATGAGTAGGAACCCTGAGGTGCAGTTAACGGTGGTGAGGCTTGTTTGGGAGAACCCTAATGATGAGTTTGATGAAACGGATAAAGAGTTTATCAAGGGTTTTGTGCAACAAACGGGGGACATGGCTAGGGTTAGGTATTTGGAGAAGGTGGTGAGGGATGAGAAGGAAACGGTGAAGCTTCTGAACAAGATAGGGAACAAAGGGTTTGATTTGTATGTGGTGGGGAGAGGGTATGGGAGGAAGATGTCTTTGGCGCAAACGGTGGATCCTGTGTTGGAGGAGCCTGCGTTGGGGCCTCTTGGGGATGCTTTGACGGATTTGAACTCTGCTGCTGAGACCTCTATTTTGATTTTCCAAAGACAGGCTCCACATGTTGAAGGGAAGCATGTGAGGGCTGCTTCTGCTTATGAGAAAGTGTTTGATAGCATGATGGAGCAGCAGTTACTGTGCCCTGCAACGAGGTTTCCAATTCTTCTAAACCATTATTCTTGA 2490 0.4739 MNSSDFGTSDFIIINSNDTLQVCFNSSEYHGSGLWIENSVEKTLPSFVLQLAIILAINRFLLLVSEQYLVPRIVANIFTGFLLGPSVLGRWHAFMKNAFPFSNMIPLETVGGMVLVYYVFLVGLEIDLKPISRLHKKAMVIAIASTIFTLPMGFGLYYMLVTDMGRKSLSHVNARPKGAILWGITLSCSSEFPEIAKILSDLKLLLTENGQLALTASLINDLFSWTLLVLALTQFYYAAVSSFVITVMLVLICYVALHPFFKWLFNNVGTGDREFLESQVIFVLHVVLVMGLLTDGLGVLSITGAFFLGVVIPQGALNNAVQDKVQDFVSVFMMPLFFVAVGERIKIQDLALDTHCTTVVVVVVLALVSKIVCTMVVSWFYQMPHLEGLSLALLMNTKGIMPLIVLCTGRDRRELDNQTFGVMLLACWLMTIPVGPVSSALTKALKSRKVLGGQRRSMQDTQPDAPLRLLACIHTKRDANVIINLLKASCPSVRAPIQVLAVELNKMTNRPTASLIIRDARKPSFTSKSSKLDTEDTLGSFDNLSQAIFAEKMRIISDYSSMHKDILNLAKRRGVTLILTTLCKQPTYDGLGAGVATARAVNIINRDHESKDEKKVVLESLVRDAKCCVAIFVDRGLSHKRSKEHRVAMLYIAGADDREALSYAWRMSRNPEVQLTVVRLVWENPNDEFDETDKEFIKGFVQQTGDMARVRYLEKVVRDEKETVKLLNKIGNKGFDLYVVGRGYGRKMSLAQTVDPVLEEPALGPLGDALTDLNSAAETSILIFQRQAPHVEGKHVRAASAYEKVFDSMMEQQLLCPATRFPILLNHYS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01971 829 Pfam Sodium/hydrogen exchanger family 56 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo5g01971 829 Gene3D - 45 450 IPR038770 -
Pumo5g01971 829 PANTHER CATION/H + ANTIPORTER 22 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01971 Pumo-Chr5 55298882 55302611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01971 16 786 Antiporter Super Family AT2G13620 32.262 4.04e-135 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01971 K26731 - gmx:100780176 1359.36