Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01970 ATGGTGAGCGTTGAATCTCGTTACACCGTGTTCCCCTCTAAACCCACCCCCAATGAAAAACTCTACTCCTTGTGCGAACAAATCAAGCTTCGCACTCACGCGCCTCTCCTTTACGTGTACAAGCCACACCCTCATCACGATGCATCAACCTTTGTTAACACCTTGAGGGACTCTCTTAGCCAAGCTTTGGCTATCTACTACCCACTTGCGGGTAGGTTGAGTTTGATCGAAGGTGGACGATGGGAGCTTCATTGCAATGTAAAGGGAGCACAACTCTTGGAAGCCAATTGCAAAGATTCGAATTTGGATGACTTGGGTGATTTTGTGCCTTCCCATTTGGTGTCACAACTCATACCCAACATTGATTACAGTGTTCCCATTGAGGACACGCCTTTGTTGGTTGCGCAGTTAACAAGGTTCCCTTGTGGTGGCGTTACGATTGGGGTGGCTTTATGTCGCGGCGCAATTGATGGAACTGCAACTATGCGATTCATGAGCACGTGGGCCAAGTTGGCTAGGAAGGAAAATTTGGACCATGAGGAAATGATGCCGTACCATAATCGAAATATGTTAAATTCGTATAAAGTTGATTCGGGGTCGCACGATCATTCGGAGTTTGGCACTCCTCCTATTTGGTTAGGTTCATTAGGAGGCAGAGACACCAAGGTTGTGGTTGAAATAGTGAAACTCACGAATGAACAAGTGAAGAAGATCAAGCACAAGGGGAGTTATGTTAACATTAACACTAGTACTAGTCCTAGTCCTAGTCCAAGACCTTATTCAACTTTTGAGGTCATTGCAGGGTACTTGTGGAGGTGTGTGAGTAAAGCACGCTATGAGGGCAAAAGTGACCAACCTACGAGGTTGTCCACTTTGGTTAACTGTAGGAACCGAATGAGTCCACCACTTCCTGGTGGGTATGCGGGAAATGCAGCATTTCCCACAGTGACACCAACATGTTCTTTTGGTGAAATCATGAATAGGCCTTTGAGTTATGCGGTTGGGAACGTTAGGGTGGCACTTGAAAGGGTGACAGGGGAGTTTGTGGGGTCAGCGCTTGATCACATAGCAAAGGAGAAAGACATGAATTTGGTGAGGTACAATTTTCATTATCCTGCTCCAAGTGTGCATAAGGGACCGTACAAGGGGAACCCGAACCTTTTTGTTGTTAGTTGGATGAATTTCTCGTATAAGGATGCGGATTTTGGATGGGGGAAGCCTGTGTATTTTGGCCCCGGGTTCATGGATTCCGAAGGGAAAGCATTTGTTATGAACAAGGCTAATGGGGATGGCTTTGTTGTGGCCATTTCTTTGGAGGCATCTCACATGGATGCTTTCAAGAAATTTTTCTACGGTGATATCCAAGAGGAATTTCCTCTTTCCAAAATGTGA 1392 0.4591 MVSVESRYTVFPSKPTPNEKLYSLCEQIKLRTHAPLLYVYKPHPHHDASTFVNTLRDSLSQALAIYYPLAGRLSLIEGGRWELHCNVKGAQLLEANCKDSNLDDLGDFVPSHLVSQLIPNIDYSVPIEDTPLLVAQLTRFPCGGVTIGVALCRGAIDGTATMRFMSTWAKLARKENLDHEEMMPYHNRNMLNSYKVDSGSHDHSEFGTPPIWLGSLGGRDTKVVVEIVKLTNEQVKKIKHKGSYVNINTSTSPSPSPRPYSTFEVIAGYLWRCVSKARYEGKSDQPTRLSTLVNCRNRMSPPLPGGYAGNAAFPTVTPTCSFGEIMNRPLSYAVGNVRVALERVTGEFVGSALDHIAKEKDMNLVRYNFHYPAPSVHKGPYKGNPNLFVVSWMNFSYKDADFGWGKPVYFGPGFMDSEGKAFVMNKANGDGFVVAISLEASHMDAFKKFFYGDIQEEFPLSKM 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01970 463 Gene3D - 1 208 IPR023213 -
Pumo5g01970 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 450 - -
Pumo5g01970 463 Pfam Transferase family 1 450 - -
Pumo5g01970 463 Gene3D - 217 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01970 Pumo-Chr5 55280623 55282456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01970 2 451 Monolignol Biosynthesis Gene Families AT5G48930 35.153 2.28e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01970 K13065 - gmx:100775549 821.231