Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01968 ATGATAACCATCCACAGTTCCCACGTCGTGGTCCCCTCCGAGACCACGCCATCCTCAAACCTCTCACTCTCCCTCTGCGACCAGATCAAGCTCCCAACCCACGGATCTCAGCTCTATCTCTACACCAACACCCGCATCACCGAAGATTCATCCTTTGCCTCTTTGATTCGTACTCTCTCAACCTCTCTCAGCAAAACACTCACTTTTTATTACCCCTTCGCGGGTCGCTTGCTCCTGATCCACGGTGGCCGCTACCAGCTCCTCTGCAACGCCAAGGGGGCACTCCTCATAGAGGCCACGTGCGACGACACTGAGCTCAGTTTCGAAGATTTGTGTGATTTCGCTCCCGCCCACGCTGTCCCCAAAATTAACTACGATGTCCCAATTGAGGATGTCCCCTTGATGGTGGCGCAGGTCACAAGGTTCCCGTGCGGTTCCATCACACTTGGGATCAACCTCTGTCGCGCTGTCCTCGATGGAACTTCAGTTACCAGCTTCGTTAACTCGTGGGCCAAGCTCGCCAGAGGAGAGAGCTTAGATTCTAGTTTGATTCCTTTGCTCGATCGAACAAAACTAGATTCTTTCAAACTCAATAAACCACCACGTTTTGAACACCCTGAGTTTTTGCCACCACCTCTTTGGACACAACAAGAACAACAACATACCCAGACAAAACAACAACTTGGTACGGCCATATTGAAACTCACAAAAGGTCAAGTTCAGAAGCTAAAGAAGAAAGCAACTGACTTTGGAAATGGGTATGGTAGTACTGGTCCCGTTCGACCTTATACTAGTTTTGAGGTTATAAGTGGACACTTGTGGAGGTGTGTTTGCAAGGTGCGTTACGCGGGTGATTCGGGTCAACCAACGAGGTTGACCACTTTGGTTAATTGTAGAAACCGTTTGAGGCCACCTCTCCCTACTTCTTATTTTGGGAATGCAACGTTTCCTACGGTGACACAAACTTGTTCCTTTGATGACATTATGCACAACCCTCTGTGCTATGCTGTGGGGAAAGTGAGAGAAGCGATTGAGAAGATGGGTGATGAGTATGTGAGGTCTGCGCTTGATTACATAGCAAGTGTGGAGGACTTGAATTTGTTCAGGGACACGTTTTATAGTTCTGGTGGGAAAGGGAAATTTAGGGGTGACCCTAATTTGTATGTGGTTGGTTGGACCAATTTTGCGTATTTTGAGACGGATTTTGGGTGGGGGAAACCGGTTTGTTTGCTTCCCGGGAACATTGGTTCTGATGGTAAGGCTTTTCTTTTGGACACTGCAAGTGGTGATGGCTTTATTGTAGCTGTTTGTTTGCTTGCATCGCATGTAGATGCTTTGAAGAAGTTGTTTTACAAGGATATAGAGAATCCTGCTTCTAAATTGTGA 1386 0.4755 MITIHSSHVVVPSETTPSSNLSLSLCDQIKLPTHGSQLYLYTNTRITEDSSFASLIRTLSTSLSKTLTFYYPFAGRLLLIHGGRYQLLCNAKGALLIEATCDDTELSFEDLCDFAPAHAVPKINYDVPIEDVPLMVAQVTRFPCGSITLGINLCRAVLDGTSVTSFVNSWAKLARGESLDSSLIPLLDRTKLDSFKLNKPPRFEHPEFLPPPLWTQQEQQHTQTKQQLGTAILKLTKGQVQKLKKKATDFGNGYGSTGPVRPYTSFEVISGHLWRCVCKVRYAGDSGQPTRLTTLVNCRNRLRPPLPTSYFGNATFPTVTQTCSFDDIMHNPLCYAVGKVREAIEKMGDEYVRSALDYIASVEDLNLFRDTFYSSGGKGKFRGDPNLYVVGWTNFAYFETDFGWGKPVCLLPGNIGSDGKAFLLDTASGDGFIVAVCLLASHVDALKKLFYKDIENPASKL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01968 461 Gene3D - 1 210 IPR023213 -
Pumo5g01968 461 Gene3D - 213 452 IPR023213 -
Pumo5g01968 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 439 - -
Pumo5g01968 461 Pfam Transferase family 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01968 Pumo-Chr5 55202108 55203801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01968 2 452 Monolignol Biosynthesis Gene Families AT5G48930 34.205 8.55e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01968 K13065 - gmx:100819383 718.768