Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01947 ATGGCAAATAGAAACCATCCCTCAGTGTTTCTTTTGTTGGTTACTATTTTACTTTCTATCCATTACTCAGAGCAATGGCAATCCTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAATTTTCCAAGTGCTTTAAGCAAGTGGAACAACAACACAGACTTTTGCAACACAGATTCCAACTCTTCCCTCACTATAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATACACCTCTCCCTCGAAATTTCTCAATAGATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTCCTCTGCCTGGTAAGATAGCTCGTTTCTCATCACTGGAAATAGTTAACATGAGTTCCAATTTCCTCTATGGTTCCATTCCTCAGGAACTTTCATCACTGTCAAATCTCCAAACTCTCATTTTTGACAACAACATGTTGGCTGACAAGTTTCCTGATTGGCTTGATTCACTTCCAGCCTTAACAGTACTAAGTTTGAAGAATAATTTGTTCAATGGATCTCTACCGAATTCGCTTGGTAATGTTGAGAATTTGAGAACTCTTTCTCTTTCTCATAATCACTTTTATGGGGTGGTGCCTGATTTGAGCCGTTTGACGAATCTTCAAGTGCTTGAATTGGATGATAACGGTTTCGGACCACAGTTTCCTCAGCTTGGTAACAAGTTGGTTACAGTAGTGATAAGAAACAATAGGTTCAGGTCAGGTATTCCTGCTGAATTGAGTTCATGCTATCAGCTTGAACGATTGGATATCTCATCAAATTCATTTGTGGGGCCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGGAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCTTGCAATTCTGAGCTTGATGTAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAGATGTTTAGTGTCAAATTCCAGTGATAGCACTGTCCTGTATGCTAGAAATTGTCTAGACACAGCGAATCAAAATCAGCAGCCACAGCCCTTTTGCCACACTGAAGCTTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAACAAGTATCTAAGGTAGTTCTTACCCTTGGCATAGTAGGGGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGACAGAAGCACAAAGAAGAATCCTCCAAAAAGATTAATATCAGAAAATGCTGCTTCTGGTTACACATCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCTTGCCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGTCAGCTGAAGAATGGCTCACTTGTTGCTATTCGGTGTGTAGAAATGAAAAAGAGATACAGCACTCAAAACTTTGTGCAACACATAGAGCTGATATCAAAACTTAGGCATCGTCATCTAGTCAGCGCTATTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGCGTCAGCAAAGTATTTCTAGTCTTCGAATATGTACCAAATGGCACGCTCAGGAATTGGATCGCTGATGAGCACGCTAGAAAATCCTTGAGTTGGACTCAACGCATAGGAGCTGCAATTGGAGTGGCAAAGGGAATCCAGTTTTTGCATACAGGGATTGTCCCTGGTGTGTATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCGAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGAAAGGTTCGGCATGGAAATTCTTCCAGTGGATCAAAAAATTCTAGCAATAATAAAAGTGTAAAGCATGAAGATAAGTCTGATATATACGACTTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGCAAATAAAGACAGCGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGCGTTGTCGATCCGGCAGTTCGCAAGGCATGCTTGGATCAATCATTGAAGACATTGATGGAGATTTGTGTGAGGTGCTTGATTAAAGAGCCAGCAGATAGGCCCTCTATAGAGGATGTTTTGTGGAATCTGCAGTTTGCATCTCAAGTACAAGATGCATGGAGAGGGGATTCACAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTCGAGGGCTACCCTTCCATTAG 2346 0.4084 MANRNHPSVFLLLVTILLSIHYSEQWQSSHSQTLLRIQQLLNFPSALSKWNNNTDFCNTDSNSSLTIVCYEDTITQLHIIGERRDTPLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGPLPGKIARFSSLEIVNMSSNFLYGSIPQELSSLSNLQTLIFDNNMLADKFPDWLDSLPALTVLSLKNNLFNGSLPNSLGNVENLRTLSLSHNHFYGVVPDLSRLTNLQVLELDDNGFGPQFPQLGNKLVTVVIRNNRFRSGIPAELSSCYQLERLDISSNSFVGPFQPGLLSLPSITYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNSSDSTVLYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHKQVSKVVLTLGIVGGTLGGVALVLLIFFIVRRGNDRSTKKNPPKRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTASLMGEDSYGKMYRGQLKNGSLVAIRCVEMKKRYSTQNFVQHIELISKLRHRHLVSAIGHCFECSLDDSSVSKVFLVFEYVPNGTLRNWIADEHARKSLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGSKNSSNNKSVKHEDKSDIYDFGVILLELILGRQIKTANDADAFRDLLQASLGADEEGRRSVVDPAVRKACLDQSLKTLMEICVRCLIKEPADRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESRGLPFH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01947 781 Gene3D Transferase(Phosphotransferase) domain 1 560 767 - -
Pumo5g01947 781 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
Pumo5g01947 781 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01947 781 SUPERFAMILY Protein kinase-like (PK-like) 459 754 IPR011009 -
Pumo5g01947 781 Gene3D Ribonuclease Inhibitor 245 361 IPR032675 -
Pumo5g01947 781 MobiDBLite consensus disorder prediction 760 781 - -
Pumo5g01947 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Pumo5g01947 781 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Pumo5g01947 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Pumo5g01947 781 MobiDBLite consensus disorder prediction 639 658 - -
Pumo5g01947 781 MobiDBLite consensus disorder prediction 639 653 - -
Pumo5g01947 781 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pumo5g01947 781 Pfam Protein tyrosine and serine/threonine kinase 481 747 IPR001245 GO:0004672|GO:0006468
Pumo5g01947 781 SUPERFAMILY L domain-like 34 353 - -
Pumo5g01947 781 PANTHER UNNAMED PRODUCT 95 680 - -
Pumo5g01947 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Pumo5g01947 781 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Pumo5g01947 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 245 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01947 Pumo-Chr5 54838263 54844787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01947 43 779 Miscellaneous Gene Families AT3G03770 62.129 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo5g01947 PK_Tyr_Ser-Thr 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01947 - - gmx:100807539 1411.36