Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01921 ATGGTTGAGCTTTTAGCAGTCATATTTACTCTCTTCTCAGGCCTTGCCTTTGTTTATCTTCTCAAACATCTTAACAAAAACAAACAAGATTCCCCACACAAATTTCCCCCTGGAAGCATGGGGTGGCCTTTTTTTGGGGAGACCCTTGGCTTCCTCAAGCCTCATAGATCAAACTCCTTGGGAAGCTTCTTACAAGAACATTGCTCTAGGTATGGCAAAGTTTTCAAGTCGCATTTGTTTGGTTCCCCCACCATAGTTTCCTGTGACTTTGAGTTCAACATGTATATTCTTCAGAATGAAGGGAGATTATTCCCTGTTGATTACCCTAAGGTGATGCATAACATCCTGGGGAAGTTCTCTGTACTTCTTGTCAAAGGAGACCTTCACAGGAAGCTAAGAAGCACCATCATCAGTTTTGTCAGTGCAACAAAGCGTGAATCCAACTTCCTTCACTGTGTGGAAATGCTTGTACTCTCAAGGATTAACTCATGGGATCCAAACTCTAAACAAGTTGCATTCTATGAAGAAGCTAAAAGGTTTACGATCAATGTTATGATGAAGCACCTACTGAACATTAATCCTGATGAGCCACTGGCCTCCAAGATCTTAGGAAACTTTGAGAACTACGTCAAAGGCTTTATTTCATTGCCAATAAATATACCCGGGACTGCATATTTCAAAGCTTTGAAGGCTAGATTAAGATTGTCGACAATTATCAAAGATATTATATTAGAGAGGCGTAAATGTAATAATGTGAGGCCTGTGCAAGGAGGGGACCTCTTGAATGTAATTTTGTCAAAGCAAAACCTAAGTGATGAAGAGATGGTGAGCATTGTGTTGGACCTCTTGTTTGGAGGATATGAGACAACTGCAAAACTTCTGTCTTTGACTGTCTATTTTCTTGGTGGAGCCACTAATGCTTTAGAAAGCTTAAAGGAAGAACACTTAGAGATAAGGAAAAGAAAAAAGGAGGGAGAACTACTTACCTGGGAAGACTATAAGCAAATGGAGTTCACTCAAAATGTGATATACGAAGCTATGAGATGTGGCAATGTAGTTAAATTTTTGCACAGGAAAGCTGTTCAAGATGTCAAATTCAAAGATTATGTGATACCCGCAGGGTGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATCCCACCCTTTTTGAAAATCCTTTGGAGTTCAACCCCTTTCGGTGGAATGACAATTCGACAAGCAAGAAAGTGGCACCATTTGGTGGGGGTCCACGATTCTGTCCAGGGGCTGATCTAGCAAAAGTGGAGACAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATCAGACCATATGATCCCCCACTTGCTTTTCCATATGTGGAATTCACCAGAGGGCTGCTATTGGATCTTGAACCCACTGCCTCTGCTTTTGGGGAACACCTTTGA 1440 0.4132 MVELLAVIFTLFSGLAFVYLLKHLNKNKQDSPHKFPPGSMGWPFFGETLGFLKPHRSNSLGSFLQEHCSRYGKVFKSHLFGSPTIVSCDFEFNMYILQNEGRLFPVDYPKVMHNILGKFSVLLVKGDLHRKLRSTIISFVSATKRESNFLHCVEMLVLSRINSWDPNSKQVAFYEEAKRFTINVMMKHLLNINPDEPLASKILGNFENYVKGFISLPINIPGTAYFKALKARLRLSTIIKDIILERRKCNNVRPVQGGDLLNVILSKQNLSDEEMVSIVLDLLFGGYETTAKLLSLTVYFLGGATNALESLKEEHLEIRKRKKEGELLTWEDYKQMEFTQNVIYEAMRCGNVVKFLHRKAVQDVKFKDYVIPAGWKVLPVLSSGHLDPTLFENPLEFNPFRWNDNSTSKKVAPFGGGPRFCPGADLAKVETAFFLHHLVLNYRWKIRPYDPPLAFPYVEFTRGLLLDLEPTASAFGEHL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01921 479 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 Pfam Cytochrome P450 36 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 CDD CYP90-like 67 470 - -
Pumo5g01921 479 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Pumo5g01921 479 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 FunFam Cytochrome P450 724B1 30 469 - -
Pumo5g01921 479 SUPERFAMILY Cytochrome P450 31 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01921 479 PANTHER CYTOCHROME P450 26 32 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01921 Pumo-Chr5 53940427 53944995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01921 40 366 Cytochrome P450 AT5G14400 55.589 2.89e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01921 K12639 - gmx:100791737 896.73