Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01908 ATGGCCGAATCATTTCTCTTTGGCATCGCGGAGTCACTCTTAGGAAAGCTTTCTTCTCGGCTTTATGAAGAAGCTCTTCAGGTGCTGGGTTTATACGACCACTTGCAAGAGTTTAAACAAACTCTATCGTTAGTCAAGGCTGTCCTGTTGGACGCTGAGCAAAAGCGGGAGCAGAACCATGAGCTGCGGGAGTGGCTGAGGCAGCTCAAGCGTGTCTTCTACGATGCTGAAGACGTGCTCGATGAATTTGAGTGCGAAACACTACGAAAACAAGTGGTCAAAGCTCATGGCACCACCAACGACAAGGTAGGTCACTTCTTCTCAAGATCTAATCCTCTTGCTTTTCGTTATAGGATGGCTCAACAAATTAAAGATATCTGCAAGAGACTAGACAAGGTTGCGGCCGATAGGCATAAGTTTGGCCTTCAAATAATAGATGTTGACAGACGTGTTGTGCACGGGAGAGAAATGACACACTCCCGTGTGAGTGATTTAGATGTGGTAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCTCATGATGATGATACAAGTCTCTCTGTTATCCCCATTGTGGGGATGGGAGGCTTGGGAAAGACTACACTTGCAAAGTTTGTGTTCAATGATAAGAGGATAGATGGGTGTTTCCCATTGAAGATGTGGGTGAGTGTTTCTGATGACTTTGACATTAAGCAACTCCTTATCAAAATCATCAATTCTGGTGCTGATGCTTCTCTCCAACAGAATTTAAACATGTTTGATCTGGAGCAACTGCAAAACCAATTGACAAACAAGCTTGCTGGTCAAAAATTCTTGCTCGTTTTGGATGACGTGTGGAATGAAGACCGTGTTAAATGGGTTGAGTTGAGGAATCTAATACAAGTAGGTGCTGCAGGAAGTAAAATTCTAATGACTACCCGTAGTCATTCAATTGCTTCCATGATGGGCACCATTCCCTCTCACATTTTAAAAGGCCTTTCTCTGGAGGATTCATTGTCTCTGTTTGTCAAATGGGCATTCAAAGAAGGAGAAGAGGAAAAACATCCTCATTTGATCAATATTGGGAGAGAAATTGTGACAAAATGCGGCGGGGTTCCATTGGCGCTGAGAACATTAGGGAGTTTACTATTTTCAAAATTTGAGGCAAATGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTGTCACAGAAAAAAGATGACATTTTACCTGCAATTAAATTAAGTTACGATCTGATGCCGGCCTATCTGAGGCAATGTTTTGCATTGTTTTCCCTTTTTCCAAAGAATGGTGATTTGCTTCAAAGTTTGAACGTAGCTCCACTTTGGGGGGCACTCGGACTGCTTTCATCACCAAAAAAGAATGGGACACCGGTAGATGTTGCCAATCAGTATTTGAATGAATTACTGTCAAGATCTTTTCTTCAAAATTTTGTCAACTTAGGCACTGGTTATGCATTTGATTTACATGATTTAATGCATGATCTTGCTCTTTTTGTTGCAAAAGATGAGTGTCTACTTATAAATTCCCACATTCAAAATATTCCTGAGAATGTTCGGCATCTCACTCTTGCAGTAAACAAATTGCCTGGCAATTTATTCACAACAAAATCAGTAGCTGTGAGAACCGCAGTGTTTCCAAATGGAGCCAACGGTAAAGCTTTACTAAATACTTGTTTGTCAAAGTTCAAATACTTGCGAGTTTTGAATTTAGGTAATACGGAATATGAGACTTTGCCTCATTCCATTGGTAATTTGAAACACTTGAGATATTTCAGCATTGTGGGAAATCACAATATTAAGAGGCTCCCTGGTTCTATTTGCAAGCTCCAAAATTTGCAAGTGTTGAATCTTGCAGGATGCATGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATCAGTCTCTGGCATTTGAGGATAACCACAAAGCAATCTGTTTTGCCTTACAATGAGATTGCCAGCTTGAGCTCTCTTGCAACTTTGTTTATTGAATCAAGCCCTAATCTGGAGTCTATCTTTGGAGATGTGAAATTCCCTGCTCTTAAAACATTGCATGTTGCTCATTGTAGGAGTCTAAAGTCTTTGCTGCTGGATGTTAAAAATTTTCCAGAATTAGAAGCTTTGACTGTTTATGACTGTGGTAATTTGGACTTGGAACTGTGGAAGCACCACCATGAAGAACAACACCCCAAGTTGAAGTTAAAACATGTTAAATTTTCGAAGTTACCACAGTTGGTGGCCTTGCCTCAATGGCTTCAAGAAACTGCCAACTCCTTACAGTTTTTCTTTATTTCAAATTGCCACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTATGACTAATCTGAAAACACTTTTTATAGGTGATTGTCCAAAGTTGGTATCTCTGCCGGATAACTTCCATCACCTCACCGCACTTGACCATTTGTGCTTTGATGGTTGTCCTGAATTATTTAGAAAATGTCAGCCCCATGTTGGAGAACTTTGGCCCAAAATATCACATATCAAAAGCGTTTTCATTGAAGAGCTCGAAGAAATGGAGGAATAG 2580 0.4047 MAESFLFGIAESLLGKLSSRLYEEALQVLGLYDHLQEFKQTLSLVKAVLLDAEQKREQNHELREWLRQLKRVFYDAEDVLDEFECETLRKQVVKAHGTTNDKVGHFFSRSNPLAFRYRMAQQIKDICKRLDKVAADRHKFGLQIIDVDRRVVHGREMTHSRVSDLDVVGRKHDKEKIIELLMQQNPHDDDTSLSVIPIVGMGGLGKTTLAKFVFNDKRIDGCFPLKMWVSVSDDFDIKQLLIKIINSGADASLQQNLNMFDLEQLQNQLTNKLAGQKFLLVLDDVWNEDRVKWVELRNLIQVGAAGSKILMTTRSHSIASMMGTIPSHILKGLSLEDSLSLFVKWAFKEGEEEKHPHLINIGREIVTKCGGVPLALRTLGSLLFSKFEANEWEYVRDNEIWNLSQKKDDILPAIKLSYDLMPAYLRQCFALFSLFPKNGDLLQSLNVAPLWGALGLLSSPKKNGTPVDVANQYLNELLSRSFLQNFVNLGTGYAFDLHDLMHDLALFVAKDECLLINSHIQNIPENVRHLTLAVNKLPGNLFTTKSVAVRTAVFPNGANGKALLNTCLSKFKYLRVLNLGNTEYETLPHSIGNLKHLRYFSIVGNHNIKRLPGSICKLQNLQVLNLAGCMELEALPKGLRKLISLWHLRITTKQSVLPYNEIASLSSLATLFIESSPNLESIFGDVKFPALKTLHVAHCRSLKSLLLDVKNFPELEALTVYDCGNLDLELWKHHHEEQHPKLKLKHVKFSKLPQLVALPQWLQETANSLQFFFISNCHNLEMLPEWLSTMTNLKTLFIGDCPKLVSLPDNFHHLTALDHLCFDGCPELFRKCQPHVGELWPKISHIKSVFIEELEEMEE 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01908 859 SUPERFAMILY L domain-like 497 844 - -
Pumo5g01908 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 431 IPR027417 -
Pumo5g01908 859 Gene3D - 10 124 - -
Pumo5g01908 859 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pumo5g01908 859 CDD RX-CC_like 2 134 IPR038005 -
Pumo5g01908 859 Gene3D Ribonuclease Inhibitor 545 853 IPR032675 -
Pumo5g01908 859 Gene3D - 417 506 IPR036388 -
Pumo5g01908 859 PANTHER DISEASE RESISTANCE PROTEIN RP 49 822 IPR044974 GO:0006952
Pumo5g01908 859 Gene3D - 332 416 IPR042197 -
Pumo5g01908 859 Gene3D - 150 326 IPR027417 -
Pumo5g01908 859 PRINTS Disease resistance protein signature 272 286 - -
Pumo5g01908 859 PRINTS Disease resistance protein signature 616 632 - -
Pumo5g01908 859 PRINTS Disease resistance protein signature 369 383 - -
Pumo5g01908 859 PRINTS Disease resistance protein signature 195 210 - -
Pumo5g01908 859 FunFam Probable disease resistance protein At1g61300 150 326 - -
Pumo5g01908 859 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01908 Pumo-Chr5 53654130 53657126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01908 574 678 WRKY Transcription Factor Family AT4G12020 35.514 4.94e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01908 - - gmx:100781317 1260.74