Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01902 ATGGAACCGAAGGTTTTCAAGGCTTTACTTCATTTTATTTATACAGACACTCTCTTGAATGACAAAGAGCTCTTTGTGCTGCATTCGTCATTCTTGCCTTCATTGTTTGAATCATTTCCAGCAAAGTTGTTAGCTGCTGGAGAAAAGTATGGTTTGCCAAGACTAAAGCTGATGTGTGAATCCGTACTTTCTAAAGACATATCTATAGATTCTGTTGCCTATATTTTGGCTCTTGCTGATCGTTATTGTGCTACCGAATTGAAGTCCATTTGTCTAAAATTTTCTACTGAAAACCTTGATGTTGTGATGCAATCTGATGGTTTCAAGTATCTTAAGAAAAATTGTCCATTACTACAATCAGAACTGCTAAAGAATGTGGTAGGATCCAAGGAGAAATTTAGTGGAGATGGAAAACATTAA 420 0.3595 MEPKVFKALLHFIYTDTLLNDKELFVLHSSFLPSLFESFPAKLLAAGEKYGLPRLKLMCESVLSKDISIDSVAYILALADRYCATELKSICLKFSTENLDVVMQSDGFKYLKKNCPLLQSELLKNVVGSKEKFSGDGKH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01902 139 Gene3D - 68 136 - -
Pumo5g01902 139 Gene3D Potassium Channel Kv1.1; Chain A 1 67 IPR011333 -
Pumo5g01902 139 Pfam BTB/POZ domain 1 65 IPR000210 GO:0005515
Pumo5g01902 139 SUPERFAMILY POZ domain 1 66 IPR011333 -
Pumo5g01902 139 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 123 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01902 Pumo-Chr5 53534409 53535133 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo5g01902 BTB 9.6e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01902 K10523 - gmx:100818306 219.55