Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01899 ATGGCCTTAATGGCAGTGCTTGGTTCTGGAGAATTCCTTATGGCATTTCTTGTTTTCGTTGTAATCCACTACTGGAGGCTCAACAGACACACCCCAATTGCTAAGTGGCCCATTCTTGGCATGCTACCTGGTCTATTGCTCAACATGGCCACCATCTTTGATTATATAACTTCGGTTTTGAAACGAGAAGGAGGCACTTTCATGTTTGAAGGACCTTGGCTATCAAACATGAACATTTTGTTTACCAGCGACCCTATGAATGTGCAACACATCACAAGCACAAAGTTTGAAAACTATGGGAAGGGGGATGATTTTAGAGAGATTTTTGAGGTTCTGGGAGATGGGATTTTCAGGTCCGATTCCCAGTTATGGAAGTATAACAGAACTATACTTCATTCAGTTTTTAAGCAGACAAGTTTTCAGTTGTTTATTCACAAAACAATCATGAACAAGATTGAGAGTTGTCTGCTTCCATTTCTTGATCATGCATGGAAAGAAGGAATGGAAGTGGACCTGCAAGATGTTTTTCAAAGGTTAACCTTTGACAACATCTGTTCCATTGTTTTAGGATTTGATCCTAATTGTCTTTCCATCGAATTCCCAGAAGTTGCAAGTGAGAAAGCGTTCACTGAAGCAGAGGATGCTCTGCTCTACAGACATTTCAGGCCAAAGTGTTTATGGAAGCTGCTGAAATGGCTTCAAGTTGGGAAAGAGAAGAAGCTGAAAGAAAGCCAGAAAATTATTGACCAAATGTTGTATGAAGAAATCAGATCCAAGTGCAAAGTGCAAGACCAAAGCATTAACAGTAGCACCCCAGTAGATGAGTCACGGATTAGCTTGCTAAATGTTCTTATAAACGAAGTAGGAAAGGGAAAAATAGATGACAGGTTTCTGAGAGACACTGCAATTAATCTCCTTGCAGCTGGGAGAGACACCATTAGTGCAGGTCTCAGTTGGTTTTTCTGGCTGGTGGCAACACACCCATCTGTGGAATCTAAGATTCTTGAAGAGATCCAAGAAAATTTACCAGCAAGAGAAGGTAATTGGAAGGATTTAGGCGCGGAATGGCTTAGCAAGTTAATTTACCTCCATGCAGCAATAAGTGAAGCCTTAAGGCTTTGTCCTCCAGTACCATTTGAGCACAAGTGTGCCTTAAAATCTGATATGCTTCCTAGTGGGCATTGGATTAATTCAAATACCATGATAGTATATTCTCTATACACCATGGGAAGGGCAGAGGAAATATGGGGTGAAGATTGCTTGAAATTTAGGCCAGAGAGGTGGATTTCTAAGAGAGGAGGGATTATTCACATACCCTCTTACAAGTTCATTGCATTCAACGCAGGACCAAGAAGTTGTTTGGGTAAGGACATAAGCTTCACTGAGATGAAGATGGTTGCTGCAGCTATATTGTGGAATTATCACATTCACTTGGTGGAAGGTCACACAATATCCCCAAGAGTTTCCATTGTCCTTCATATGAAACATGGCTTGAAGGTTAGAGTGACAAAAAGAAACATCTGTGATCAAGGGATCTAA 1539 0.4094 MALMAVLGSGEFLMAFLVFVVIHYWRLNRHTPIAKWPILGMLPGLLLNMATIFDYITSVLKREGGTFMFEGPWLSNMNILFTSDPMNVQHITSTKFENYGKGDDFREIFEVLGDGIFRSDSQLWKYNRTILHSVFKQTSFQLFIHKTIMNKIESCLLPFLDHAWKEGMEVDLQDVFQRLTFDNICSIVLGFDPNCLSIEFPEVASEKAFTEAEDALLYRHFRPKCLWKLLKWLQVGKEKKLKESQKIIDQMLYEEIRSKCKVQDQSINSSTPVDESRISLLNVLINEVGKGKIDDRFLRDTAINLLAAGRDTISAGLSWFFWLVATHPSVESKILEEIQENLPAREGNWKDLGAEWLSKLIYLHAAISEALRLCPPVPFEHKCALKSDMLPSGHWINSNTMIVYSLYTMGRAEEIWGEDCLKFRPERWISKRGGIIHIPSYKFIAFNAGPRSCLGKDISFTEMKMVAAAILWNYHIHLVEGHTISPRVSIVLHMKHGLKVRVTKRNICDQGI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01899 512 PANTHER CYTOCHROME P450 25 500 - -
Pumo5g01899 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Pumo5g01899 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 SUPERFAMILY Cytochrome P450 35 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01899 512 CDD CYP86A 67 498 - -
Pumo5g01899 512 Gene3D Cytochrome P450 18 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01899 Pumo-Chr5 53393630 53395168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01899 1 506 Cytochrome P450 AT2G23180 44.509 2.58e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01899 - - gmx:100785815 939.102